KEGG   Thermothielavioides terrestris: THITE_2123179
Entry
THITE_2123179     CDS       T02228                                 
Name
(RefSeq) hypothetical protein
  KO
K14328  regulator of nonsense transcripts 3
Organism
ttt  Thermothielavioides terrestris
Pathway
ttt03013  Nucleocytoplasmic transport
ttt03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ttt00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    THITE_2123179
   03015 mRNA surveillance pathway
    THITE_2123179
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ttt03019]
    THITE_2123179
Messenger RNA biogenesis [BR:ttt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     THITE_2123179
   mRNA cycle factors
    P-body specific factors
     THITE_2123179
SSDB
Motif
Pfam: Smg4_UPF3 RRM_1
Other DBs
NCBI-GeneID: 11522075
NCBI-ProteinID: XP_003657452
JGI: Thite2_2123179
UniProt: G2RGY7
Position
6:complement(join(590670..592620,592684..592922))
AA seq 729 aa
MGTPQLLSKKTNGGSLTQSSADAPTAPKVKAPMQGEKVVVRRLPPGMTEEEFVTILGDEW
AVGHGRVDWFSYWPGKVSKHPSKPSRPARAYLHVTRRDLLTALLQTVQSNKWEDAKETYN
DPALVSLPTVEFATYKKIPSGKKRVDGRQGTIDQDPEFMAFLEGLANPDVNKEAPNADQG
AEETSKTEKTTTTPLVEYLKEKRAAKAKDAAAAKSAKHARHDSQGGKAKTAPAAAEEPKK
KSRDGKPEKEKAPEKPAQKPKESVKILTKKAAAAAEAAAEAAKAVAAQMQPSAQPSAQPS
AQSGSQEALPKSRRAGIAAAARILQRDLGLSPGNAHRKARQEAAKAEAEAKATPTKETGK
PIVTAASEPAAPSSPAESSASSAPAKTQPSASGRARNRKRGTGEDTGKPKGDAKGDTKGE
KPAEPATSTPPKGPIAVLKKKDSSQQVPSPQTQPATTSAPSGPSTPNVSAQPATAAPASG
PKSTAQKQGAASKKASTPAAPSPGATRAFVKHANHSQGVTEALLKEALQAFGTVTSVEID
RKKGFAYVDFASHDGLAKAMAASPVAVAQATVQVLERKEMGKKGSASAPTQGKNAAHPAP
ASAQAQQAQPPAKAASPAAAPAPQPAPPEQTQGQTQSAPPPTQQQQTPAPASAAGPATAA
GDKAGSGEQQPGGKRGGRRRGGRGRGDKDKDAKEGKEGKKEGGGSGGGAKKSDGAGGGAA
GSGVSAGTA
NT seq 2190 nt   +upstreamnt  +downstreamnt
atgggcaccccacagctgttgtcgaagaagacaaacggcggttcacttacccagtcttcc
gccgatgcgccgacggctcccaaggtgaaagcccccatgcagggcgagaaggtcgtggtt
cgccgtttaccgccgggcatgacagaggaggaattcgttaccatcctcggggacgagtgg
gcggtcggacacggcagggtcgactggttttcgtactggccggggaaagtctcgaaacat
ccatcaaagccgtcgcggcccgcccgcgcatatctccatgtcacccggagggaccttttg
accgcgcttctccagacggtgcagtcgaacaagtgggaggatgccaaggagacgtacaat
gaccccgccctcgtgtccctgcctaccgtcgagttcgccacctacaagaagatccccagc
ggcaagaagcgcgtggatggacgccagggcaccattgaccaagacccggaatttatggct
tttctcgagggcctggccaatcctgacgttaacaaagaagctcccaacgcggaccagggc
gctgaagagaccagcaagaccgaaaagacgacaacaacgcccttagtcgagtacctgaag
gagaagagggcggctaaggccaaggacgccgctgcggcaaagagcgcaaagcacgcgcga
catgactcgcaggggggcaaggccaagacagccccggcggctgctgaggagcccaagaag
aaatccagggatggcaagcctgagaaggaaaaagcgccagagaagcccgcgcagaagccg
aaggagtcagtcaagatcctaactaagaaggccgctgctgcagcagaagcggccgccgag
gccgcaaaggctgttgcagcccagatgcagccgagcgcccagcccagcgcccagcccagc
gcccagtcaggatcccaggaggctctcccaaagagccgcagggccggcatagctgctgct
gcccggatactgcaacgcgacttgggccttagccctgggaatgcgcaccgcaaggcccgc
caagaagcggccaaagcagaagcagaggcaaaggcaacccctacgaaggagaccgggaag
ccaatcgtgaccgctgcgtcggagccagcagccccttcttcgcccgcggagtcctcggcg
tcgtccgctcctgccaaaacacagccctccgcttcaggcagagcacggaataggaaacgc
ggcactggcgaagataccgggaaaccaaagggagatgcgaagggtgacaccaagggcgag
aaaccggcagagcccgccacctcgaccccgccaaaagggcctatcgccgtgttgaagaag
aaggacagcagccagcaagtcccatcgccgcaaacacaacccgcgacaacatcagcgcca
tcaggtccctccacacccaacgtatcagctcagcccgcaacagcagcccctgcgtctggg
cccaagtccaccgcccaaaagcagggcgccgcttccaagaaagcgagcacgccggccgct
ccgagcccaggtgccactcgtgcgttcgtcaagcacgccaaccactcccaaggcgtaacc
gaggcactgctcaaagaggccctccaggcgttcggcaccgtcacaagcgtcgagatcgac
cgcaagaagggcttcgcctacgtcgatttcgccagccacgacggcctcgccaaggccatg
gccgccagccccgtcgccgtcgcccaagccaccgtgcaggtcctcgagcgcaaggagatg
ggcaagaaagggtcggcatcggcgccgacgcaggggaagaacgctgctcatcctgcgccg
gcgtctgcacaggcccaacaggctcagccgccggccaaggctgcttctcccgctgccgct
cctgctccgcaacctgccccaccggagcaaactcaaggccaaactcagtctgcgccaccc
ccaacacaacaacaacaaaccccagctcccgcttcggcagccggacctgctaccgcggcc
ggggacaaggcaggctctggtgagcagcagccgggaggcaagcgcggtggaaggagacgc
ggcggacgggggaggggggataaagataaggatgcgaaggaggggaaggagggtaagaag
gaaggcggtggcagtggcggtggtgcgaagaagagtgatggggctggaggcggtgcggct
ggctcgggggtttcggcgggtacagcgtga

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