KEGG   Thermothielavioides terrestris: THITE_2123770
Entry
THITE_2123770     CDS       T02228                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
ttt  Thermothielavioides terrestris
Pathway
ttt03013  Nucleocytoplasmic transport
ttt03015  mRNA surveillance pathway
ttt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ttt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    THITE_2123770
  09122 Translation
   03013 Nucleocytoplasmic transport
    THITE_2123770
   03015 mRNA surveillance pathway
    THITE_2123770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ttt03019]
    THITE_2123770
   03041 Spliceosome [BR:ttt03041]
    THITE_2123770
Messenger RNA biogenesis [BR:ttt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     THITE_2123770
    TREX complex
     THITE_2123770
Spliceosome [BR:ttt03041]
 Complex C
  Other components
   EJC/TREX
    THITE_2123770
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    THITE_2123770
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_occluded
Other DBs
NCBI-GeneID: 11522259
NCBI-ProteinID: XP_003657766
JGI: Thite2_2123770
UniProt: G2RHW8
Position
6:join(1643723..1643953,1644014..1644043,1644925..1645089,1645150..1645476)
AA seq 250 aa
MSGKLDQSLDEILSNQRRNQQGRRRSQRRAAGATRSATTAPAGGIQKSSKAARTAAKPTP
AKGAGLTGESKIMVSNLPKDVSEGQIKDYFQQTVGQVKKVELSYGPGGVSRGIAHVTFHH
ADGASKAFSTLNGLLIDNKPVKVEVVVSSAELIPQPKPLAQRIAAPKAQPKSAAAVKQNG
TGAKGSAAAGKSTKKTGRRGRSNRPVKKTAEELDSEMADYFESANTENNAGGAAPAAAAG
GDAPMEEDVL
NT seq 753 nt   +upstreamnt  +downstreamnt
atgtctggcaagctcgaccagtctctcgacgagattctctccaaccagcggcgcaaccag
cagggccgtcgccgctcccagcgtcgcgctgctggcgccactcggtccgccaccactgcc
ccggctggcggcatccagaagagctcaaaggctgcgcgcactgcggccaagcctaccccc
gcgaaaggcgctggtctgactggcgagagcaagatcatggtcagcaacttgcccaaggat
gtttccgaaggccagatcaaggactacttccagcagacagtcggtcaggtcaagaaggtc
gaactttcctacggacccggtggcgttagccgtggcattgctcatgtcacattccaccat
gccgatggcgccagcaaggctttcagcaccctcaacggtcttctgattgacaacaagcct
gtcaaggtcgaagttgttgtctcttccgcagaattgatcccccagcccaagccactcgct
cagcgcatcgcggcgcccaaggctcagcccaagtccgccgctgccgtgaagcagaacggt
accggcgccaagggcagtgctgcggctggcaagtcgaccaagaagacgggccggcgcggc
cgcagcaaccggccggttaagaagacggcggaggagctggactcggagatggccgattac
tttgagagcgccaacaccgagaacaacgccggcggcgctgcccccgcggctgctgccggt
ggcgatgctccgatggaggaggatgttctttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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