KEGG   Tupaia chinensis (Chinese tree shrew): 102478436
Entry
102478436         CDS       T02978                                 
Symbol
DHX8
Name
(RefSeq) DEAH-box helicase 8
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tup00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102478436 (DHX8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tup03041]
    102478436 (DHX8)
Spliceosome [BR:tup03041]
 Complex C
  Other components
   Step II factors
    102478436 (DHX8)
SSDB
Motif
Pfam: OB_NTP_bind HA2_C S1 Helicase_C HA2_N DEAD AAA_22 AAA_19 nSTAND3 Flavi_DEAD AAA_16 T2SSE TsaE PhoH Sigma54_activ_2 ABC_tran
Other DBs
NCBI-GeneID: 102478436
NCBI-ProteinID: XP_006167468
Position
Un
AA seq 1232 aa
MAVAMLLAGALTGSEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKSSTSKDPVVKPKTEKEKLKELFP
VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDAEHRDRTKKKKRSRSR
DRDRERDRDRDKDLSFDRERDRERDRDRDHKRRHRSRSRSRSRTRERNKGKSRYRSRSRS
QSPLKDRKDRDKYGERNLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIMQFGCFVQLEGLR
KRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNP
NRRRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAA
NVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNP
DGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGI
GMMPNDIPEWKKHAFGGNKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIG
ETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRF
EDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR
QDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIH
LTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPA
PPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRA
GRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDA
PPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTI
VSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQ
ARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLI
DQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTK
LSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq 3699 nt   +upstreamnt  +downstreamnt
atggctgtggctatgctcttggcgggggccctaaccgggtcggagccaggccccgcggaa
gaactcgccaaactcgagtatttgtctttggtgtcgaaggtttgcaccgagctggacaat
cacttggggatcaatgacaaggatctagctgaatttgtgatcagtcttgctgagaaaaat
accacctttgatacttttaaagcttctcttgtcaaaaatggtgcagaattcacagattct
cttattagtaacttgctgcgtctcatacaaaccatgcggcctccagcaaagtcttctacc
agcaaagatccagttgttaaacccaaaactgaaaaagaaaagctgaaggaactcttccca
gtcctttgccaaccagataacccttcagttcggaccatgctggatgaagatgatgtgaaa
gtagctgtggatgtcctgaaagaactggaagctttaatgcccagtgcagcaggccaggag
aagcaaagagatgctgaacaccgggacaggacaaagaagaagaagcggagtcggagccga
gatcgagaccgagaacgagatcgagaccgagacaaagatctctcttttgacagagaacga
gaccgagaacgagaccgagatagagaccacaagcggagacaccgatcccggtctcgatca
cgttccaggacccgggagaggaataaagggaagtctagatatcggtccagaagtaggagt
cagagtcctctcaaagacaggaaggaccgggacaagtatggggagaggaatctggaccga
tggcgggataagcatgtggaccgccctcccccagaagagcctgccattggggacatttac
aatggcaaagttaccagcatcatgcagtttggatgctttgtgcagctggagggactaagg
aagcggtgggaaggcctggtgcacatctctgagctccggcgggaaggccgcgtggctaat
gtggcagatgttgtgagcaaaggccagagggtcaaagtcaaggtgctgtccttcactggg
accaagaccagtctgagcatgaaggatgtggatcaagagactggagaagatctgaaccca
aatcgacgtcgaaaccttgttggggagaccaatgaggaaacctcaatgcggaacccagac
agacccactcacctttcccttgtcagtgcccctgaagtagaggatgactcactggagcgc
aagcgcctcacccgcatttctgacccagagaagtgggagatcaaacagatgattgctgcc
aatgtcctttccaaagaagagtttccagactttgatgaagagactggcattctccctaag
gtggatgatgaagaagatgaggaccttgagattgaactggttgaggaagaacctccattc
ctgagagggcacaccaagcaaagcatggatatgagccccatcaaaattgttaagaaccct
gatggctccctgtcccaagcagcgatgatgcagagtgccttggccaaagaaaggcgggag
ctcaagcaggcccaacgggaagccgagatggattccattcccatgggactcaacaaacac
tgggtcgatcctcttcctgatgcggaaggcaggcagattgctgccaacatgaggggtatt
gggatgatgcccaatgacattccggagtggaagaagcatgcctttgggggcaacaaagct
tcttatggaaaaaagacccagatgtcaatcattgagcagagggagagcctgcctatttac
aaactgaaggagcagttggttcaggctgttcatgacaatcagatcctgattgttattgga
gagacaggatctgggaagacaacgcagatcacccagtacctggcagaggcaggctacact
tctaggggcaagatcgggtgtacccagcccagaagagtggcagccatgtcagtggccaaa
agggtgtcagaggaatttggttgttgcctaggccaagaggtgggctacaccattcgattt
gaagactgcactagccctgaaacagtcatcaagtacatgacggacgggatgttgctcaga
gagtgcctgattgaccctgacctcactcagtatgccatcatcatgctggacgaggcacat
gagaggacaattcacaccgatgtactctttggattgctgaaaaagactgttcagaaacga
caggacatgaagttgattgtcacctcagccaccttggatgcagtgaagttttcccagtac
ttctacgaagctcccatctttaccatcccaggtcggacatatccagtggagatactttac
accaaggaacctgagacagattatctggatgccagcctgatcactgttatgcagattcat
ttaacggagccaccaggtgatatcctagtctttctgactggtcaggaagagatcgatact
gcttgtgagatcctgtatgaaaggatgaaatccctcggacctgatgttccagagttaatt
attctcccagtgtactctgctcttcccagtgagatgcagacccggatctttgacccagct
ccccctggcagcagaaaggtcgtgattgccaccaacattgcagagacatcgctgactatc
gacggcatctattacgtggtggaccctggatttgtgaagcagaaagtttacaattccaag
acagggatcgaccagctcgtggtgacaccaatttctcaggctcaggcaaagcaacgagct
ggcagagctgggagaacgggcccagggaagtgttaccggctgtacactgaacgtgcctac
cgagatgaaatgctgaccaccaatgtgccagaaatccagagaaccaacttagcaagcaca
gtgctgtcacttaaggccatgggcatcaatgacctgttatcctttgacttcatggatgcc
ccaccaatggaaaccttgatcacagccatggagcaactgtatacgctgggggccctggac
gatgagggcctgctaactcgcctgggccgcaggatggcagagttccctctagagccaatg
ctatgcaaaatgctcatcatgtctgtgcacctgggctgcagtgaggaaatgctgaccatc
gtatccatgctgtctgtgcagaacgtcttctacaggcccaaggataaacaagccctcgca
gatcagaagaaggccaaatttcaccagactgaaggggaccacctcaccttgctggctgtg
tacaactcctggaagaacaacaagttctccaacccgtggtgctatgagaactttatccag
gctcgttccttgcgccgggcccaggacattcgcaagcagatgttaggcataatggacaga
cacaagctggatgtggtctcctgtggcaagtccacagtccgagtgcagaaggccatctgc
agtgggttcttccgcaatgctgccaagaaagacccacaggagggttaccggacactgatt
gaccagcaggtggtctacatccacccttccagtgctctcttcaatcgacagccagaatgg
gtagtgtaccatgagctggtgctgaccacaaaggagtacatgcgtgaggtcaccaccatc
gacccccggtggcttgtggagtttgccccagctttcttcaaggtctctgacccaaccaag
ctaagcaagcaaaagaagcagcagcgtcttgaacccttatacaaccgctatgaggagccc
aacgcctggagaatatctcgggccttccggcggcgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (16)   
   Pfam (16)   
All databases (58)   

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