KEGG   Tupaia chinensis (Chinese tree shrew): 102479121
Entry
102479121         CDS       T02978                                 
Symbol
U2SURP
Name
(RefSeq) U2 snRNP associated SURP domain containing
  KO
K12842  U2-associated protein SR140
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tup00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102479121 (U2SURP)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tup03041]
    102479121 (U2SURP)
Spliceosome [BR:tup03041]
 Complex A
  U2 snRNP components
   U2 related factors
    102479121 (U2SURP)
 Complex B
    102479121 (U2SURP)
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 SET_assoc RRM_7
Other DBs
NCBI-GeneID: 102479121
NCBI-ProteinID: XP_006162360
Position
Un
AA seq 1029 aa
MADKTPGGSQKASSKTRSSDVHSSGSSDAHMDASGPSDSDMPSRTRPKSPRKHNYRNESA
RESLCDSPHQNLSKPLLENKLKAFSIGKMSTAKRTLSKKEQEELKKKEDEKAAAEIYEEF
LAAFEGSDGNKVKTFVRGGVVNAAKEEHETDEKRGKIYKPSSRFADQKNPPNQSSNERPP
SLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDG
QRRNMDAPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPL
ASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPP
HPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIVKVV
IPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSI
LQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPSKKGALKEEQRD
KLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSD
VLYNSSAKVANASYYRKFFESKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDW
AIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAPLEDVDGIPIDATP
IDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWE
LFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPIKEEMTESKFSKYSEMSEEK
RAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKK
DKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSPSPKSERSERSERS
HKESSRSRSSHKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRS
HKKSKKNKH
NT seq 3090 nt   +upstreamnt  +downstreamnt
atggcggacaaaacgccaggcggctctcagaaggccagttcaaagaccagatcatcagat
gttcattcatctggatcttcagatgctcatatggatgcatctggaccctcagatagtgat
atgccgagtcggacacgacctaagagcccaaggaaacataattacaggaatgaaagtgcc
cgtgagagcctttgtgattctcctcatcagaatctctcaaaacctctcctagaaaacaaa
cttaaagcattcagtattggaaaaatgagtacagctaagcgaactttaagcaagaaggaa
caagaagaattaaagaaaaaggaggatgaaaaggcagctgctgagatttatgaggaattt
cttgctgcttttgaaggaagtgatggcaataaagtgaaaacatttgtacgaggaggtgtc
gttaatgcagctaaagaagaacatgaaacagatgaaaaaagaggtaaaatttataagcca
tcttcaagatttgcagatcaaaagaatcctccaaatcagtcatccaatgaaagaccacca
tctcttcttgtgatagaaaccaaaaagcctccactgaagaaaggggagaaagaaaagaaa
aaaagcaatttggaactcttcaaagaagaattaaaacaaatccaagaagagcgtgatgag
agacataaaactaaaggcaggttaagtcgattcgagcctcctcagtcagattctgacggt
cagcgccgtaatatggatgcgccttcaagaagaaatagatcatctggtgttcttgatgat
tatgcccctggctcacacgacgtaggagatccaagcactactaatttatatctgggaaac
attaatccacagatgaatgaagaaatgctgtgccaagaatttgggagatttggaccatta
gccagtgtgaaaattatgtggcctagaactgatgaagaaagggcaagagagcgaaactgt
ggctttgtggcttttatgaatagaagagatgctgaaagggctttaaaaaatttaaatgga
aaaatgataatgtcatttgaaatgaagttaggttggggtaaagctgtacctattcctcca
cacccaatatacattccgccttctatgatggaacatacgcttcccccacctccatctgga
ctgccatttaatgcacagcctagagaacggttgaaaaaccccaatgctcccatgttacca
ccacccaaaaacaaggaggatttcgagaagactctgtcgcaagccatagtcaaagtggtt
atcccaacagaaaggaatttgctcgccctgatacatcgaatgatagagtttgttgtacgt
gaagggccaatgtttgaagctatgattatgaacagagaaatcaacaatcctatgttcagg
ttcttatttgaaaatcagacaccagcccacgtttactataggtggaagctttattctatt
cttcagggagattctccaacgaagtggcggacggaagattttcgtatgttcaaaaatgga
tctttttggaggccaccaccattaaatccatacctgcatgggatgtcagaagagcaagaa
acagaagcttttgtagaagagcctagtaaaaagggagcacttaaggaagaacagagggac
aaattagaagaaatcctgcggggattaactccaagaaaaaatgacattggagatgcaatg
gttttctgtctcaataatgctgaagctgctgaagaaatagtggattgcattactgagtcg
ttgtccatcttaaagacaccccttcctaaaaagattgccagattatatttggtttctgat
gttttgtacaactcttcagccaaagttgccaatgcttcatattatagaaaattttttgaa
tcaaaattatgtcagatattttcagacctcaatgctacctatcgtacaattcaaggtcat
ttacagtctgaaaactttaagcaacgggtaatgacctgcttcagagcatgggaagattgg
gcaatttatccagaaccatttttgatcaaattacaaaatattttcttaggacttgtaaat
attattgaagaaaaggaaacagaggatgtgccagatgacctcgatggtgcccccattgag
gaagagcttgatggtgcgcctctggaagatgtggatggaattcctattgatgccactccc
attgatgatctcgatggagtccctataaaaagtcttgatgatgatcttgacggagtgcct
ttggatgcaactgaagactcaaagaagaatgagcctatatttaaagttgccccatcaaaa
tgggaagctgtagatgaatctgaattggaagcacaagctgtaacgacttctaaatgggag
ctctttgaccagcatgaagaatcagaagaagaagaaaatcaaaatcaagaagaagaaagt
gaagatgaggaagatactcaaagttccaaatctgaagaacatcatctgtactctaaccca
atcaaagaagaaatgactgaatctaagttttctaagtactctgaaatgagtgaggaaaaa
cgagctaaacttcgtgagattgagctcaaagttatgaagtttcaggatgaattggaatct
ggaaaaagacctaaaaaaccaggccagagttttcaggaacaagtagaacactacagagat
aagcttcttcaacgagaaaaagagaaagaattagaaagagaacgagaaagagataagaag
gataaggagaaattggaatcgcgatctaaggacaagaaggaaaaagatgaatgcactcca
acaaggaaagaaaggaaaaggcggcacagtacgtcccccagcccgtcccgcagtagcagt
ggaagacgagtgaaatccccgtcaccaaaatcggagcgatccgagcgttccgaaagatct
cataaagaaagctcacggtccaggtcatcgcacaaagattctcccagagatgttagcaaa
aaagccaaaagatcaccttctggttcaaggacacctaaaaggtctaggcggtcacggtct
agatcccctaaaaaatcagggaagaaatccagatcccagtcccgatcgccacacagatct
cataaaaaatcaaagaaaaacaaacactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (10)   
   RefSeq(nuc) (6)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (49)   

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