KEGG   Tupaia chinensis (Chinese tree shrew): 102483349
Entry
102483349         CDS       T02978                                 
Symbol
UPF2
Name
(RefSeq) UPF2 regulator of nonsense transcripts homolog (yeast)
  KO
K14327  regulator of nonsense transcripts 2
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup03013  Nucleocytoplasmic transport
tup03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tup00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102483349 (UPF2)
   03015 mRNA surveillance pathway
    102483349 (UPF2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tup03019]
    102483349 (UPF2)
Messenger RNA biogenesis [BR:tup03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     102483349 (UPF2)
   mRNA cycle factors
    P-body specific factors
     102483349 (UPF2)
SSDB
Motif
Pfam: MIF4G Upf2
Other DBs
NCBI-GeneID: 102483349
NCBI-ProteinID: XP_006150078
Position
Un
AA seq 1267 aa
MPAERKKSASMEEKDALLNNKEKDCSERRPVSSKEKPKDDLKLTAKKEASKAPEDKKKKP
EDDKRKKEDKERKKKEDEKVKTDEESKKKEEEEKKKHEEEERKKQEEQAKRQQEEEAAQL
KEKEESLQLHQEAWERHQLRKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFASSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKSQNKESNKDDPKEAKEPKDNKEISSPDDLELELENLEINDDTLELEGGDEAED
LTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRK
KLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIET
KNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHL
RTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKD
LSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVG
IHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVN
PDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEVW
TKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESLRQVHDLEQEFLIKLGLVNDKDSKDS
MTEGENLEEDEEEEERGTETEEQSGNESEVNEPEEEEGSDDDDEGEEEEEENTDYLTDSN
KENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVAIP
LHLKSQLRKGPPLGGGEGETESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWSQQQ
AEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNADL
IFKTGGR
NT seq 3804 nt   +upstreamnt  +downstreamnt
atgccagctgagcgaaagaagtcagcaagtatggaagaaaaagacgctttactaaacaac
aaggaaaaagactgcagtgaaaggcggccagtgagtagcaaggagaaaccaaaagatgat
ctcaagctcactgccaagaaggaggccagcaaggcccccgaagacaagaagaagaaacca
gaagacgataagagaaaaaaggaagataaggagcgcaagaaaaaagaagatgaaaaggta
aagacagacgaagaatcaaagaagaaagaggaagaagagaaaaagaaacatgaagaggaa
gagagaaagaagcaggaagagcaggcaaagcgtcagcaagaagaagaagctgctcagttg
aaagagaaagaagaatcccttcagcttcatcaggaagcttgggaacgacatcaattaaga
aaggaacttcgtagcaaaaaccaaaatgctccagataaccggccagaggaaaatttcttc
agccgcctagactcaagtttgaagaaaaatacagcttttgtcaagaaactaaaaactatt
acagaacagcagagggactccttgtcccatgactttaatggcctaaatttaagcaaatac
attgctgaagctgtagcttctattgtggaagcaaagctaaaaatctctgatgtgaactgt
gctgtgcacctgtgctcactctttcaccagcgctatgctgactttgcctcatcacttctt
caggtctggaaaaaacattttgaagcaaggaaagaggagaaaacacctaacattaccaag
ttaagaactgatttgcgtttcattgcagaattgacaatagttgggatttttactgacaag
gaaggtctttccttaatctatgaacagcttaaaaatattattaatgctgatcgggaatcc
cacactcatgtttctgtggtgattagtttctgtcgacattgtggagatgatattgctgga
ctcgtaccaaggaaagtaaagagtgctgcagagaagtttaatttgagttttcctccaagt
gaaataattagtccagagaaacaacaacctttccagaatcttttaaaagagtactttacg
tctttgaccaaacacctgaaaagggaccacagggagctccagaatactgagagacaaaac
aggcgtattctacattctaaaggggaactaagtgaagatagacataaacagtatgaggaa
tttgctatgtcttatcagaagctgctggcaaattctcaatccttagcagaccttttggat
gaaaatatgccagatcttcctcaagacaaaccaacaccagaagagcatggacctggaatt
gatatatttacacctggtaaacctggagaatatgacttggaaggtggtatctgggaagat
gaagatgctcgcaatttttatgagaacctcattgatttgaaagcttttgttccagccatc
ttgtttaaagacaatgaaaaaagtcagaacaaagagtccaacaaagatgatcctaaagag
gcaaaagaacctaaggataataaggagatatcaagccctgatgatttggaacttgagttg
gagaatctagaaattaatgatgataccttggagttagagggtggagatgaagctgaagat
ctcacaaagaagcttcttgatgaacaagaacaagaggatgaagaagccagcactggatct
catctcaagctcatagtagatgctttcctccagcagttgcccaattgtgtcaaccgagat
ttgatagacaaggcagctatggatttttgcatgaacatgaatacaaaagcaaacaggaag
aagttggtacgagcactcttcatagttcctagacaaaggttggatttgctaccattttat
gcaagattggttgctacattgcatccctgcatgtctgatgtagcagaggatctttgttcc
atgctgaggggggatttcagatttcatgtacgaaaaaaggaccagatcaatattgaaaca
aagaacaaaactgttcgttttattggagaattaactaaatttaagatgtttaccaaaaat
gatacacttcattgcttaaagatgcttctatcagacttttctcatcaccacattgaaatg
gcatgtaccttgctggaaacgtgtggacgatttcttttcagatcaccagaatctcacctg
aggaccagtgtacttttggagcaaatgatgagaaagaaacaagcaatgcatcttgatgca
agatatgtcaccatggtagagaatgcatattactattgtaacccacccccagctgaaaaa
acagtgaaaaagaaacgtcctcctctccaggaatatgtccggaaacttttatacaaggat
ttgtctaaggttaccactgaaaaggttttgagacagatgcgaaagttgccctggcaggac
caagaagtgaaagactatgttatttgctgtatgataaacatatggaatgtgaaatataat
agtattcattgtgtagccaatcttttagcaggactggtactctaccaagaggatgttggg
atccatgttgtggatggagttttagaagatatacgattaggaatggaggttaatcaacct
aaatttaatcagcggcgtatcagcagtgcaaagttcttaggggaactttataattaccga
atggtggagtcagctgttattttcagaactctttattcctttacttcgtttggtgttaac
cctgatggatctccaagttcactggaccctcctgagcatcttttcagaattagactagta
tgcactattttggatacctgtggccagtactttgacagaggttccagtaaacgaaaactt
gattgctttcttgtatatttccagcgttatgtttggtggaagaaaagtttggaagtttgg
acaaaagatcatccatttcctattgatatagattacatgatcagtgatacactagaactg
ctaagaccaaagatcaaactctgtaattctctggaagaatccctcaggcaggtacatgac
ttggaacaagaattcttaataaaactaggcctagtaaatgacaaagattcaaaagattct
atgacagaaggagaaaatcttgaagaggatgaagaagaggaagagaggggaaccgaaaca
gaagaacagtctggaaatgaaagtgaagtaaatgaaccagaagaagaggagggttctgat
gatgatgatgaaggagaggaggaagaggaagagaatacagattatcttacagattctaat
aaggaaaatgaaactgatgaagaaaatactgaggtaatgattaaaggaggtggacttaag
catgtaccatgtgttgaagatgaggacttcattcaagctctggataaaatgatgctagaa
aatcttcagcaacgaagtggcgaatctgtgaaagtgcaccaacttgatgttgctatccct
ttgcatctcaaaagccagctgaggaaagggcctccccttggtggtggagaaggagagaca
gagtctgcagacacgatgccatttgtcatgttaacaagaaaaggcaataaacagcagttt
aagatccttaatgtacccatgtcttcccaacttgctgcaaatcattggagccagcaacag
gcagaacaagaagaaaggatgcgaatgaaaaaactcacactagatatcaatgaacggcaa
gaacaagaagattatcaagaaatgttgcagtctctcgcacagcgcccagctccagcaaac
accaatcgtgaacggcggcctcgttaccaacatccgaagggagcacctaatgcagatcta
atctttaagactggtgggaggtaa

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