KEGG   Tupaia chinensis (Chinese tree shrew): 102498463
Entry
102498463         CDS       T02978                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60
  KO
K20103  ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:tup00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tup03019]
    102498463
Enzymes [BR:tup01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     102498463
Messenger RNA biogenesis [BR:tup03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     102498463
SSDB
Motif
Pfam: DEAD ResIII Helicase_C
Other DBs
NCBI-GeneID: 102498463
NCBI-ProteinID: XP_014438109
Position
Un
AA seq 1719 aa
MGLGINFEKRMISLLKDFVESEFFLIDGDSLLITCFLNVNLKKGQTLHFFYIVEQLLHDF
IKKEAKFAVVFFKDAENMYFDFPELAALRVMLIQHLKQNTEVNIYTEFSNCLSPEWEIFL
KDCYPYFLIVSETGITPHQTDFLNILIIHALQKKINIVQSLGLESDVLRIYGYHASSCYR
HKEFFEMHEKNLQQILHDYLLEHFRKSQKTEIFLYDHLKLNLGEMQKEHEKNLQQILHDY
LLEHFRKSQKTEIFLYDHLKLNLGEMQKEIDGNLSLLQNLWPEGADIRSIVCSVSCSVTL
KLYKKMLQDVPDCEDLNTCTEIPDAQEVIKAPTLNEAADLCRMHCLSIAFLQHLPLLQRA
KSRIITSIWDRTLQPFLRMLKRCEFFILKQLTSRSNWNVNFTNLPDLTDNILWKNIAYYY
EIEYCRGLNLELGDTLKHEYHKLWNTVLTLAGEDDFGESMPVRTTSRPFLTEKNTSPQES
SQEIHKSGLIPLKSEIMEDYAGDILSELSFLSSGDPAVMSLYKKKEFDELIHWHSSRPLS
NDFERTMDSSAVKSNDAKERRKVQKLHHFYHFFGKSLISRNRAVQIVIGRPLPPLPANSS
GHKRRQQKMNAEKFTEENQKKQLAKLKKREEKRWNNLSLSIDKEIKVNLNSGLRRLEDFL
QACPVKSVKFIAEMVGLEACFKVWLKYCLESEAEPKDLSIVIQLMKRIHIIHEKYSEFLE
NTHRQKLAKYLKYIGFDNLAHSLCSQVNNLENKSDIEKEISKYSVHMGAARFQLTHMGPH
LLREERSDPDPRVQNFIPDTWQRELLDVVDNNESAVIVAPTSSGKTYASYYCMEKILRES
DEGVVVYVAPTKALVNQVVATVYSLFKKSLPEGLVVCGVFTRDYRHDTLNCQILVTVPQC
LEILLLAPHNQKWVKRIRYVIFDEVHCLGGEIGAEVWEHLLVMIRCPFLALSATISNPEH
LTEWLASIKSYWQQVESTMENSDPCQNVLKGSKEQQRKRIEKPSYRVRLVLHKERYNDIE
KYVCFLKDNDFIMEHYHPCAALTVNHIKKYGIPSDLALSPRESILLYDAMVHIWPEWSRM
QELEPEEFSYFKNKVVIMRPDAKKYEEELKKEMLHWIEQDPDKVNYLLMYLKPQTFDSEE
AEKERIYNIHSVEYSASQLHTNLVNKQNTQNYSNPERENKLIKKLWKAMKTQKKIHMADS
KSDSTDRIQRMTSLEAEIEQNIEKYYKVPADCTYAGHQTVDYKTLRKILSRLCETRQGYK
LFKLLHRGIGYHHGAMEYKKRQVVEMLFRLGHVQVVAATSTLALGINMPCKTVVFTADSV
FLDALNFRQMSGRAGRRGEDNIGNVFFYNIPLPKIQRLLKSNMPELKGQFPLKVSLILRL
MILVAKADDKEDGKAKALSVLQHSLMSFKQPKMKSILKFYFIYSLQFLVTEGYLNQECIP
IGYSGLVSHLHYHEPANFIFVSLLVKGLFHKLCIPTNKNGQKKFSKAVMETLVVVLANLF
GRRYLSPSEELKKRSSYSTVILDDLPEDFTMVVEEHNNRIKKHFGSFLLTISKLADMKKE
YQLPLSKIDFLGKECEDSELVSHLMPGAESRTAISPFACLSNITDQDLFDINVINDARLQ
TINVSTNNLPFLCLNKYKNGRKCQLNSYALNFYKKGSLSALTRENGLNIGDAFTLIRDFT
LVIQSIRISLSELCDDENDNVVLAFKQLNETFKKNLWKK
NT seq 5160 nt   +upstreamnt  +downstreamnt
atgggattaggaattaattttgaaaagagaatgataagcttacttaaagactttgttgag
tcagaatttttcttgattgacggagattcattactcatcacttgttttctcaatgtgaac
ttaaagaaaggacaaactcttcacttcttctatattgtggaacaacttctgcatgatttc
atcaaaaaagaagccaaatttgcagttgtattttttaaggatgcagaaaatatgtatttt
gatttccctgaactggcagcccttcgtgtcatgttgattcaacatttaaaacaaaatacc
gaagtcaatatttacacagaattttccaattgtttgtcaccagaatgggagatatttctt
aaagattgttatccatatttcctaattgtctccgaaactggaataactcctcaccaaaca
gacttcttaaacattcttatcattcatgctcttcagaaaaaaatcaatattgtacaatct
ttgggactagagtcagatgtccttaggatttatggataccatgcctcaagttgctataga
cacaaagagttctttgaaatgcatgagaaaaacctgcaacagatcttacatgactaccta
ttagagcatttccgaaagtcacagaaaacagaaatatttctgtatgatcacttgaaacta
aatttgggagagatgcagaaagagcatgagaaaaacctgcaacagatcttacatgactac
ctattagagcatttccgaaagtcacagaaaacagaaatatttctgtatgatcacttgaaa
ctaaatttgggagagatgcagaaagagatagatggaaacttgtccttgcttcagaacctg
tggccagaaggagctgatatcagaagtattgtatgttctgtttcatgttctgtgacgctg
aaactatataagaaaatgttacaggatgtaccagactgtgaagatctaaacacatgcaca
gaaattcctgatgcacaggaggtgatcaaagccccaacactaaatgaagcagcagacctt
tgcagaatgcattgccttagtatagctttccttcaacatttacctttgcttcaaagagct
aagagtagaatcattacttccatttgggacaggacacttcaaccatttctaagaatgcta
aagaggtgtgaatttttcatcctaaaacaactaacatctagaagtaattggaatgtgaat
ttcaccaacctgccagacttaactgataatattttgtggaaaaatattgcttattattat
gaaattgaatactgtagaggactgaacttggaattgggtgacactttgaagcatgagtat
cacaaactgtggaacacagtcttaaccttggcaggggaggatgattttggagaatccatg
cctgtgaggacaacttccagaccatttcttacagagaaaaatacatcacctcaagaatcc
agtcaggaaattcataaatcaggactcattcctctgaagtctgagattatggaagattat
gctggagatattttgtcagaactgtcttttctaagcagtggtgacccagctgttatgtct
ctttataagaagaaagaatttgatgaacttatacactggcattcttctagacctctcagt
aatgattttgaaaggactatggacagtagtgctgtcaaatctaatgatgccaaagaaagg
agaaaagtacagaaattacatcatttttatcatttctttggaaaatctttgataagccgt
aacagagcagtacagattgtaataggaagacctctgcctccacttccagcaaattcctct
ggacacaaaagaagacagcagaagatgaatgcagaaaaatttactgaagaaaatcaaaag
aagcagctagctaaactgaaaaaaagggaggaaaaaaggtggaataacttgtccttgtct
attgacaaagaaattaaagtgaatctgaactctggattgagaagattagaagattttctc
caagcatgtcctgttaaatctgtaaaatttatagcagaaatggtgggattggaagcctgt
ttcaaagtatggctgaaatactgtctagaatcagaagcagagcccaaagacctaagcata
gtaattcagttgatgaaaaggattcacataatccatgaaaaatattcagaattcttagaa
aatacacacagacaaaaattagccaaatatctgaaatacattggatttgacaacctggca
cactcattatgttctcaggtaaataatctagaaaataaatcagatatagagaaagaaatt
tctaaatattcagttcacatgggagcagcacggtttcagttaacacacatgggcccacac
ttacttcgagaagaaaggagtgatccagatcccagggtgcagaattttataccagacaca
tggcagagggaactccttgatgttgtagataataatgagtctgcggtgattgttgctcca
acttcgtcagggaaaacctatgcgtcttactactgcatggagaagatcttgagagagagc
gatgaaggggtggttgtatatgttgccccaacaaaggctcttgtaaatcaagtggtggca
actgtctacagtttgttcaaaaagtccctcccagaaggattagtggtgtgtggagttttc
acaagagactaccgtcatgacaccttgaattgtcagatattggtgacagtacctcagtgt
ttggaaatactcttgctagcacctcataatcaaaagtgggtcaaaaggataagatatgtc
atatttgatgaggttcactgtcttggtggagaaattggagctgaagtttgggaacatctt
cttgttatgattcgatgtccctttttggcactttctgctactatcagtaatcctgagcat
ctcactgagtggttggcatcaattaaaagctattggcaacaagttgaaagcacaatggaa
aattctgatccatgccaaaatgtcttgaaagggtcaaaggaacaacaaagaaaaagaata
gaaaaaccatcatacagagttagattggtattgcacaaagagcgatacaatgatatagag
aagtatgtgtgtttcttaaaggataatgactttatcatggaacactatcacccatgtgct
gctcttacagtcaaccatataaagaaatatggaattccctcagaccttgctctatctcct
cgggaaagcatactgctttatgatgctatggtacacatttggccggaatggtcaagaatg
caggaattagaacctgaagaattcagctacttcaaaaataaagtagtcatcatgagaccg
gatgctaagaagtatgaagaggaactgaaaaaagaaatgcttcactggattgagcaggac
ccagacaaggtgaattatttgctgatgtatcttaaacctcaaacctttgacagtgaagaa
gctgaaaaagaaagaatatacaatattcactcagtggaatattcagcttcacaacttcat
actaatttggtaaataaacaaaatactcagaattattcaaatcctgaaagagagaacaag
ttgatcaagaaactatggaaagcaatgaagacccagaaaaaaattcatatggctgattca
aaatcagattcaactgatagaattcaaagaatgacttcattggaggctgaaatagagcaa
aacattgaaaaatattataaggttcctgcagactgtacttatgctggtcatcaaactgtg
gattataagactttaaggaagatcttatccagactgtgtgaaacaagacaaggctacaaa
ctgttcaaactattacaccggggcattggatatcatcacggggcaatggaatataaaaaa
agacaagtcgtagagatgcttttcagattggggcatgttcaggtggtagcagcaacctca
acccttgctttgggaattaatatgccatgtaaaactgttgtttttactgcagattctgtt
tttttggatgctttgaactttcgacagatgtctggtcgtgcaggaagacgaggagaagat
aatataggaaatgtattcttctataatattccattacccaagattcaaaggcttttgaag
tcaaatatgcctgaactgaagggtcagtttcctttgaaggtgtccttgatcctcagactt
atgatattagttgccaaagcagatgacaaagaggatggcaaagcaaaggcattatccgtg
ctccaacattcactgatgtccttcaagcaaccaaagatgaagtccattttaaaattttac
tttatatattctttgcaattcttggtcacagagggatacctgaatcaagaatgtattccc
attggctattctggacttgtgtcccatttacattatcatgaacctgcaaattttattttc
gtgagcttgctggtgaaaggtttatttcacaaattatgtattccaaccaacaaaaatggt
cagaagaaattttctaaagctgtgatggagactttagtagtggtattagcaaatcttttt
ggaagaagatatctttcgccctctgaagagttaaagaagagaagttcttattcaacggta
attctagatgatcttcctgaggactttaccatggtagtagaggaacacaacaacagaatt
aaaaagcactttggttccttccttctaacaatttctaagttggctgacatgaaaaaagaa
taccaactacctctctcaaaaatagactttttaggtaaagaatgtgaagactccgaattg
gtctctcatttgatgcccggggctgaaagtagaactgctatctctcctttcgcttgtctg
tctaatatcactgaccaagatttatttgatattaatgtgataaatgatgctaggttacaa
acaattaatgtgagcacaaataaccttcctttcctttgtttgaataaatataagaatggg
aggaaatgtcaattgaattcttatgcattgaacttctacaaaaagggatccctgtcagct
ttgactagagaaaatgggttaaatatcggagatgcctttactcttatcagagactttaca
cttgttattcagtccatcaggatttcacttagtgaattatgtgatgatgaaaatgacaat
gttgtgttggcatttaaacaactaaatgaaacattcaagaaaaatctttggaaaaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (57)   
   KEGG ORTHOLOGY (1)   
   RefGene (53)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (70)   

Download RDF
DBGET integrated database retrieval system