KEGG   Turicibacter sp. H121: AT726_00940
Entry
AT726_00940       CDS       T04254                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
tur  Turicibacter sp. H121
Brite
KEGG Orthology (KO) [BR:tur00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tur03032]
    AT726_00940
   03400 DNA repair and recombination proteins [BR:tur03400]
    AT726_00940
Enzymes [BR:tur01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     AT726_00940
DNA replication proteins [BR:tur03032]
 Prokaryotic type
  DNA Topoisomerases
   AT726_00940
DNA repair and recombination proteins [BR:tur03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AT726_00940
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim Toprim_4 DNA_ligase_ZBD Toprim_C_rpt RNA_POL_M_15KD COA8
Other DBs
NCBI-ProteinID: AMC07698
UniProt: A0A0X8G291
Position
complement(213833..215896)
AA seq 687 aa
MGKNLVIVESPAKAKTIENYLGSDYVVLSSVGHIRDLATTGPGGLGVDVEDHFKPNYKNV
TGKSKVIKELKQAAKNSDAVYLATDPDREGEAISWHLADVLGLDVDLERRVVFNEITKDA
ILEAFKHPRAIDMDLVRSQESRRILDRIIGFKLSKLLQSKIKSKSAGRVQSVALKLIVER
EKEIQKFVSEEYWSVHAMFERESAKIEAELVKKANKKISIANEDEVKAILAELSDPYVVE
KVEKKKKSKQPKLPFITSTLQQEAASKLGYNAKKTMTIAQKLYEGVNIGSETVGLITYMR
TDSTRLADNFVDATKSFIKQNYGANYVKTGSTNAKKVKNAQEAHEAIRPSSVARTPEEMK
PYLKRDELRLYKLIWERAVASLMKSATVEATTIEVRSNDYLFRVNGQVLVFDGYLRVYSY
EETKNAALPRLSEGDTLALVDVEPQQHFTQPPARYSEAKLIKEMEELGIGRPSTYAQTME
TLKNRGYVTLEDKKFKPTDQGILTSEKLAEFFSEFINVEYTAEMENNLDEISKGQKVWYD
ELKVFYDHFMPMLEDAQKNMEKIAPVEIGEECPECGSPLVIRRGRYGEFVACSGYPTCKY
IKKETKEEAAPVSTGVKCPKCEKGEIVEKKTRRGKVFYGCNQYPSCDYALWHKPVDKKCP
KCDSLLVVKGKKNEIQCPNKECDYKEE
NT seq 2064 nt   +upstreamnt  +downstreamnt
atggggaaaaatttagtaattgtagagtcgcctgctaaagctaaaacgattgaaaactac
ttaggatcagattatgtggttctatcaagcgttggtcatattcgagatttagcaacgaca
ggtccaggaggtttaggtgtggatgttgaagaccactttaaacccaactataaaaacgta
acaggaaaatcaaaggtcattaaagaattaaaacaagcagctaaaaattcagatgctgtt
tacctcgcaactgaccccgaccgcgagggagaggcgattagttggcatttagcagatgtt
ttaggacttgatgttgatttagagcgtcgagtagtatttaatgagattacaaaagatgcg
attttagaagcattcaaacatccacgtgcgattgatatggatttggttcgctctcaagaa
agtcgtcgtattttagaccgcattattggatttaaattaagtaagttattacaaagtaaa
atcaaaagtaaaagtgcgggacgagttcaatcagtagcattgaagttaattgttgaacgt
gagaaagaaattcaaaaattcgttagtgaagaatactggtcagttcatgctatgtttgag
cgggaaagtgcaaaaattgaagcagaattagtaaagaaagctaataagaagatttcaatt
gcgaatgaagatgaagtcaaagccatcttagctgaattaagtgatccttatgtagtggaa
aaggttgaaaagaaaaaaaaatcaaaacaaccgaagttaccatttatcacttcaactctt
caacaagaagctgcaagtaaattaggttataatgcgaagaagacaatgacaattgctcaa
aaattatacgagggggttaatatcggttccgaaactgttggattaattacatatatgcgt
accgactcgactcgtttagccgataacttcgttgatgcaactaagtcatttattaaacaa
aattatggtgcaaattatgttaaaacaggaagtacaaatgcgaagaaagttaaaaatgca
caagaagcgcatgaggctattcgcccatcatcagtcgcgcgtacaccagaagagatgaaa
ccttatttaaaacgtgatgaactgcgtttatataaactcatttgggaacgtgctgttgcg
agcttaatgaaaagtgcaacagttgaagcgacaacgattgaagttcgctcaaatgattac
ttattccgcgttaacggtcaagtgctagtgtttgatggatatttacgtgtctatagctat
gaagaaacaaaaaatgcagctttaccacgtttaagtgaaggggatacgttagcgttagtt
gatgttgaaccacaacaacattttactcaaccacctgctcgttatagcgaagcgaaatta
attaaggaaatggaagagttagggattggacgtccatcgacttatgcacaaacaatggag
acgttaaaaaatcgaggttacgtgacacttgaggataaaaagtttaagccaacggatcaa
ggaattttaacaagtgagaaattagctgaattcttctctgagtttattaatgtggagtat
actgcagagatggaaaataatttagatgaaatttcaaagggacaaaaagtttggtacgat
gaattaaaagtcttttacgatcattttatgccaatgcttgaagatgctcaaaaaaatatg
gagaaaattgctccagttgaaattggggaggaatgtccagaatgtggtagtccacttgtc
attcgtcgtgggcgttacggtgagtttgtcgcatgtagtggctatccgacatgtaagtat
attaaaaaggaaacaaaagaagaggctgcacccgtttcgacaggagttaaatgtccgaaa
tgtgaaaaaggtgaaatcgttgaaaagaaaacacgccgtggaaaagtcttctatggatgt
aatcaatatccaagctgtgattatgcactttggcataaaccagttgataagaaatgtcca
aaatgcgatagcttgttagtcgttaaagggaagaaaaatgaaattcaatgtccgaataag
gaatgtgactataaagaagaataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (165)   
   KEGG ORTHOLOGY (1)   
   RefGene (162)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (180)   

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