KEGG   Trichophyton verrucosum: TRV_00338
Entry
TRV_00338         CDS       T01615                                 
Name
(RefSeq) hypothetical protein
  KO
K15322  tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
Organism
tve  Trichophyton verrucosum
Brite
KEGG Orthology (KO) [BR:tve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tve03016]
    TRV_00338
Enzymes [BR:tve01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     TRV_00338
Transfer RNA biogenesis [BR:tve03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    TRV_00338
SSDB
Motif
Pfam: tRNA_int_endo tRNA_int_endo_N
Other DBs
NCBI-GeneID: 9581705
NCBI-ProteinID: XP_003025469
UniProt: D4CZU5
AA seq 432 aa
MTSSTSELKTVCPEKSVPHNGAAKGRPRRPNYKHIHRFPLPITVHPLPPLIPHNPLSLLS
IALSYLTFYISPPQPITCSAYFDACTSSIQVTDSKTIRILWEMGFFGKGSLSRSEPSWLE
REKKRRGLIGQSTSEEATRMRRVERRQFKLERARKEKEAIAEQLRAEGKLPEGPASDIST
SALDDEAARETKTAEGSTSAPNDELAGKTATNRAKSVRFSPTVEVADINDDVEVEDEEHL
QLSSEDAFFLSYGLGVLEVYDDTRSTVLKPQALLALLRQHSYFPPRAPSAAPEPDDRFMI
SYVAYHHFRSLGWVVRSGVKFGVDLLLYNKGPVFSHAEFAVNLLPSYSHPYWKETEERRE
YVAAKLNHTWWWLHCVNRVQAQVKKSFVMCFVEIPPPATGSKPDEQDIGELLKTYQVREL
AVKRWVPNRSRD
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgacatcttctacctcagaactgaagaccgtttgtccggagaagtcagttccgcacaat
ggagcagctaagggtcgacctcggcggccaaattataaacacattcaccggtttccccta
cctataactgttcacccattgccccctttaataccgcacaaccccctttcactcctcagt
attgccctctcatatctcaccttctatatatctccgcctcagccaataacatgctcagct
tattttgacgcttgtacctcttccatccaagttacagattccaagaccatccgtatctta
tgggagatgggtttttttggtaaaggtagcctaagtagaagcgagccgtcgtggctcgaa
cgcgagaaaaaaagaagagggcttattggccaaagcacaagcgaggaagcaacaaggatg
aggcgagtagagagacgacaattcaagctggagagagcaagaaaggagaaagaggccatt
gctgaacaactcagagccgagggaaagttaccagaggggccagcatcagatataagtacg
tcggccttagatgatgaagcagctcgggaaacgaaaactgctgaaggcagtacatctgca
ccaaatgatgaacttgctggaaagacggctaccaatcgcgccaagtctgttcgtttctca
cctacggtggaagtggcagatataaatgacgatgttgaggtagaagacgaagagcacctt
cagctttccagtgaagatgctttcttcctttcatacggccttggtgttcttgaggtatat
gatgataccagaagcacagtacttaaacctcaagcactccttgccttgctccgccagcat
tcatacttcccgcctcgtgctccctctgcggcgcccgaaccggacgaccgatttatgatt
tcatacgttgcatatcaccatttccgttccctcggctgggttgttcggtccggagtcaag
tttggtgtcgacttgcttctatataacaaaggcccagtcttttcacatgctgaattcgct
gtcaatcttctcccgtcctacagccatccgtattggaaagagactgaagagagacgagag
tatgtggctgcaaagctgaaccatacgtggtggtggcttcactgcgtaaaccgggtgcaa
gcccaggttaaaaagagcttcgttatgtgttttgtggagatcccaccacctgcaacaggt
agcaagcctgacgaacaggatattggagagctcctgaagacatatcaggtccgggaattg
gccgtcaagcgatgggtgccgaaccggagccgtgattga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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