KEGG   Trichophyton verrucosum: TRV_02219
Entry
TRV_02219         CDS       T01615                                 
Name
(RefSeq) hypothetical protein
  KO
K13174  THO complex subunit 5
Organism
tve  Trichophyton verrucosum
Pathway
tve03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tve00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    TRV_02219
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tve03019]
    TRV_02219
   03041 Spliceosome [BR:tve03041]
    TRV_02219
Messenger RNA biogenesis [BR:tve03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     TRV_02219
Spliceosome [BR:tve03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    TRV_02219
SSDB
Motif
Pfam: FmiP_Thoc5 SPATA1_C DUF948 Casc1_N DUF4200
Other DBs
NCBI-GeneID: 9582190
NCBI-ProteinID: XP_003023644
UniProt: D4D549
AA seq 270 aa
MAVEQIVTDPALIPALKTCSDTLSEAHKLIDLLEKGIQTPSSNPNETLQEAYKQQRHVYS
LLAQLRGLNREAILNVRSTKQATAEARQEIDRLHLQLQNLYYEQRHLSGEIAACESYDHS
YLSLPLIPVEEFISLHPEHANSDEHELTIARINHEHAEREKLEQARQELLKKKQALIAEN
KKRKEDLASLDQDLERFIDVSLTSKLHTCSHETLLTTTFSGCETYPEDIRKGLRACHPEV
KWRRQMSSGLGSLYYDYLAMFIYPAWIKES
NT seq 813 nt   +upstreamnt  +downstreamnt
atggccgtcgagcagatcgtcaccgaccctgcccttatccccgccctgaaaacttgttcg
gacaccttgagcgaggcgcataagctcatcgacctgctggaaaaagggatccaaaccccc
tcgtcgaaccccaacgagacgctgcaggaagcgtacaagcagcagagacacgtttattcg
ctgctggctcagctacgtggactcaaccgtgaggccattctcaatgtcaggtcaaccaag
caggccacagcggaggcacgccaggagatagacagactgcacctgcagcttcagaatctg
tactacgaacagagacacctgagcggcgagatagccgcatgcgagtcatacgaccatagc
tatctgtcattgcccttgataccggtggaagagttcattagcctgcatccagaacatgca
aactcggacgaacatgaacttacgattgcccgaattaaccatgagcacgcagagagggaa
aagctcgaacaggcccgccaggagctcttgaagaagaaacaggctctcattgcagaaaac
aagaagagaaaggaagatctcgccagtctagatcaggacttggaacggttcattgatgtc
agcctcacttctaaactccatacatgtagccatgaaaccctgctaaccacaacattttca
ggctgcgaaacctatccagaagatattcgaaaaggtctacgtgcctgtcacccggaagtc
aaatggagaagacaaatgagttcaggactaggatccttgtattatgattatttggctatg
tttatataccctgcatggataaaggagtcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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