KEGG   Thiocystis violascens: Thivi_3676Help
Entry
Thivi_3676        CDS       T02138                                 

Definition
formamidopyrimidine-DNA glycosylase Fpg (EC:4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
tvi  Thiocystis violascens
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:tvi00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Thivi_3676
Enzymes [BR:tvi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Thivi_3676
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Thivi_3676
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(4005451..4006278)
Genome map
AA seq 275 aa AA seqDB search
MPELPEVETTLRGIRPHLEGRRIARLLVRDPRLRLPIPPETPELVAGQIIGALARRSKYL
LIGLERGALIVHLGMSGSLRIVAPGSPPKRHDHVDLALDDGHCLRFHDPRRFGLFLWTPE
SPEIAQVQHPLLRDLGPEPLGDSFDGDYLHALSRTRRVAIKSFIMDAAVVVGVGNIYANE
SLFLAGIHPARHCHRVGLERYRRLAATIRAVLRASIEQGGTTLRDFVNEDGQPGYFAQSL
RVYGHAGEPCGICGEPLRVKRIGQRSSFFCPRCQH
NT seq 828 nt NT seq  +upstreamnt  +downstreamnt
atgcccgaacttcccgaagtcgaaaccacgctacgcggcatccgtccgcacctggagggc
cgccggatcgcgcgcctgctggtgcgcgatccgcgtctgcgtctgccgattccgcccgag
actccggaactggtcgccggacagatcatcggcgcgcttgcgagacgtagcaaatatctg
ctgatcggactcgagcgcggcgcgctgatcgtccatctgggcatgtccggcagcctgcgg
atcgtcgcccccggcagtcctccgaaacggcacgatcatgtggatctggcgctcgacgac
gggcattgtctgcgctttcatgacccgcgccgcttcggtctctttctctggacgcccgag
tcgccggagattgcgcaagtccagcatccgctgttgcgcgatctgggaccggagccgctg
ggcgactcgttcgacggagactatctccatgcactgagccgaacgcggcgggtcgcgatc
aagagcttcatcatggatgcggcggtggtggtcggggtcggcaacatctacgccaacgaa
tcgctttttctggccggtatccatcccgcgcgccactgtcaccgcgtcggtctggaacgc
taccggcggctggccgcgacgatccgcgcggtcctgcgggcgtccatcgaacagggcgga
accacgctgcgggacttcgtcaacgaggacgggcaacccggctatttcgcccaatcgcta
cgggtttacggacacgcgggcgagccgtgtggaatctgcggcgaacccttgcgagtcaaa
cggatcggacagcggtcgagctttttctgtccgcgctgtcaacattaa

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