KEGG   Thiocystis violascens: Thivi_3779
Entry
Thivi_3779        CDS       T02138                                 
Name
(GenBank) UDP-N-acetylmuramyl tripeptide synthase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
tvi  Thiocystis violascens
Pathway
tvi00300  Lysine biosynthesis
tvi00550  Peptidoglycan biosynthesis
tvi01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:tvi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Thivi_3779
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Thivi_3779
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:tvi01011]
    Thivi_3779
Enzymes [BR:tvi01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     Thivi_3779
Peptidoglycan biosynthesis and degradation proteins [BR:tvi01011]
 Precursor biosynthesis
  Amino acid ligase
   Thivi_3779
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C YqeC Fer4_NifH AAA_31
Other DBs
NCBI-ProteinID: AFL75623
UniProt: I3YF55
Position
complement(4113212..4114651)
AA seq 479 aa
MPTDPLSQLLDTLDFAWRRAPATRRALTNIQWRADACDAGSILFFQRFDDGRSDDELYRR
YLADGAFSVLVVNRPLDCFERLTDKAIYVARSDDWPQVVARFCDLCYPLGSSRLTFIGVT
GTNGKTTTVKYLESILAAHGQRVLSIGTLGLFRNGERLMETGFTSPPQIELRRLLHAQQD
RCDVVVMEISSHALDQGRAYGIPLQNAGWTNFTQDHLDYHHDESSYFSAKARILDLIQDG
GRLYCSSPAVARQLREAGLSRVPVEVLAPATLEPDAIAAKPFLALAHNRRNYALATALAD
GILGPGARADWRHLSPVDGRFECRTIGNRTLVIDFAHTPDALDTILTAIRDGFPRTRILT
LFGCGGDRDHGKRPLMGAAVARQSDHCIVTSDNPRTEPPERIIADILTGMPTDGVEVIVE
RPQAIAHLFDWLAERPTDEAWVALIAGKGHERYLDRNGRKEYYSDQDEVERSLKRLGWI
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgccaaccgatccgctctcccaactgctggacaccctggacttcgcctggcggcgcgca
ccggcgacgcggcgcgcgctcaccaacatccagtggcgcgcggacgcctgcgatgccggc
tcgatcctctttttccagcgcttcgacgatggacgcagcgatgacgaactctaccgccgc
tatctggccgatggcgccttttcggtgctggtcgtcaaccgcccgctcgattgcttcgag
cgcctgacggacaaagccatttatgtcgcccggtccgatgactggccgcaagtggtcgcg
cgcttctgcgacctctgttatccactgggcagcagccgcctcaccttcatcggggtcacc
ggaaccaacggcaagaccacgaccgtcaaatatctggagtcgatcctcgccgcccacggc
cagcgggtgctctccatcggaaccctggggctctttcgcaacggcgaacggctgatggag
accggattcacctcgccgccccagatcgaactgcgtcgtctgctgcatgcccaacaagac
cgttgcgatgtggtggtcatggagatcagcagtcacgcactggaccagggacgggcctac
ggcattccgcttcagaacgctggctggaccaacttcacccaggaccatctggattatcac
cacgacgagtcatcctattttagcgccaaagcgcgcattctcgacctgatccaggacggc
gggcgactctattgcagcagtccggccgtggcccgccagcttcgggaagcggggctgtcg
cgcgtgccagtcgaggttctggcgccagcaaccctggagccggacgccatcgcggccaag
ccgtttctcgccctcgcacacaaccgccggaattatgcgctcgccaccgccctggcagac
ggcatcctcggccccggcgcgcgcgccgactggcgacatctgagccccgtggacgggcgc
ttcgagtgccggaccatcggcaaccggaccctcgtcatcgacttcgcccataccccggat
gcgctggacaccatcctgaccgccatccgcgacggcttcccgcggacccgcatcctgacc
ctgttcggctgtggcggcgaccgcgaccacggtaaacgcccgctgatgggcgctgccgtc
gcacgccagtccgaccactgtatcgtgacctcggacaacccgcgtaccgagccccccgaa
cgcatcatcgcggatattttgactggtatgccgacggacggcgtggaggtcatcgtcgag
cggccacaggccatcgcgcatctgttcgactggctcgccgagcgcccgacggacgaagcc
tgggtcgccctgatcgccggtaagggacacgagcgttatctcgaccgcaacgggcgcaag
gagtattacagcgaccaggacgaggtggagcgcagtctgaagcgtctcggttggatttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

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