KEGG   Trametes versicolor: TRAVEDRAFT_116703
Entry
TRAVEDRAFT_116703 CDS       T04795                                 
Name
(RefSeq) AP endonuclease
  KO
K10771  AP endonuclease 1 [EC:3.1.11.2]
Organism
tvs  Trametes versicolor
Pathway
tvs03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tvs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    TRAVEDRAFT_116703
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tvs03400]
    TRAVEDRAFT_116703
Enzymes [BR:tvs01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     TRAVEDRAFT_116703
DNA repair and recombination proteins [BR:tvs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     TRAVEDRAFT_116703
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-GeneID: 19407392
NCBI-ProteinID: XP_008035250
JGI: 116703
Position
Unknown
AA seq 474 aa
MAALRRSTRIATPTASTSLISSKDTANGRRARSPSGSSLSSLSSPFNLHADANPRPTKRA
RTGAAKDPATPLQEKQRRTKKGPIAEPKPDDFSVRATSAWKVGPHVSSAGGVENAIINAA
SVGANAFAIFLKSQRKWESDALKDESIAKFKERMKTFGYSPSHILPHGSYLVNLGNPDSE
KREKSFTCFLDDLKRCEQLGLHLYNFHPGSTVGAGTIEESLALIAECINRAHTETASVVI
VLENMCCVRRCQAGSGNVIGSRFSDLGGIIKQVSDKTRVGVCLDTCEFPYGYNITTLEGW
RYTPPRVVEEFEREVGAHYLRGMHLNDSKGALGSKKDRHENIGQGHLGLRTFAHILSDLR
TRDIPLVLETPAYDVPTGSSAAARESLATEGMGVWRTEVAVLNRLARRSAEEVGEEEIGE
MRAEIAEAVVKASKVRDAKGKKPVVGGKSGRKSKKKVEVEEEDDDDDSCCESAH
NT seq 1425 nt   +upstreamnt  +downstreamnt
atggccgctctcagacgaagcacacgcattgctactccaaccgcctcgacatctctgatc
tcctcaaaggacactgcaaatggccgacgggctcgatctccctctggctcctctctcagc
tcgctgtcctcgccttttaatctccatgctgacgccaatcctcgccctaccaaacgcgcc
cgcacaggtgctgctaaagacccagcgacacccttgcaggaaaaacagcgtcggacaaaa
aagggtccgattgctgagcctaagcccgacgacttctccgtccgagcgactagtgcgtgg
aaggttggcccacacgtctcttcagccggcggcgtggagaacgctattatcaacgcggcc
tcagtgggtgcgaacgcgttcgccatcttcctcaaatctcagcggaaatgggagtccgac
gcgctcaaggacgagtcgatagcgaagttcaaagaacgcatgaagaccttcgggtactcg
ccctcgcatatcctcccgcacggcagctacctcgtaaatttgggcaatcccgatagtgag
aagcgcgaaaagtcctttacgtgtttcctggacgacttgaagcgttgcgagcagttaggg
ctgcatctatacaacttccacccgggctctaccgtcggcgctgggaccatagaagagtcc
cttgcgctcatagctgagtgtatcaaccgtgcacacacggagacggccagcgtcgtcata
gtattggagaacatgtgttgcgtgcgtcgctgccaagcaggctcagggaacgtcatcggc
tcgcgattctcggacctgggtggcatcatcaagcaggtcagtgacaaaacccgagtaggc
gtctgtttggacacttgtgagttcccgtatgggtacaacatcaccacactcgaaggctgg
aggtacacgcccccacgcgtagtggaagaattcgagcgcgaggtaggcgcacattacctc
cgcggcatgcacctcaacgactccaagggcgcgctcggaagcaagaaagaccggcacgag
aacatcggccagggccacctgggcctccgcacgttcgcgcacatcctcagcgacctgcgc
acgcgcgacatcccgctcgtcctcgagacgcccgcatacgacgtgcccaccggatcgagc
gccgcggcgcgcgagagcctcgcgacggagggtatgggcgtgtggcgcaccgaggtcgcg
gtactcaaccgtttagctaggcgcagcgcggaggaggtgggggaggaggagataggggag
atgcgggcggagatcgcagaggcggtggtgaaggcgagtaaggtgcgagatgcgaagggg
aagaaaccagtggtgggcggcaagtctgggcggaagtcgaagaagaaagtcgaggtggaa
gaggaggatgatgatgatgatagttgttgtgaatccgcgcactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (24)   

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