KEGG   Tropheryma whipplei Twist: TWT396Help
Entry
TWT396            CDS       T00116                                 

Definition
DNA glycosylase (EC:3.2.-.-)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
twh  Tropheryma whipplei Twist
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:twh00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    TWT396
Enzymes [BR:twh01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     TWT396
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     TWT396
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
CNRS_Marseille: 
UniProt: 
Position
complement(485944..486828)
Genome map
AA seq 294 aa AA seqDB search
MPEGHSIHRSAIQFEHNFVGKKIGISSPQGRFSPGARLLDKQRMISAKAYGKQLLLGFEN
NRFLQVHLGIYGAWQFYGNISCAPTILPGAEGIQSIGAPRRLKGPCITKNSGSTPGASWK
DLMFKHQAQARAKLITDTAGVLLSGPAVCKVLTPEEADELISRLGPDPVVNPMGYNRFIK
AARKSNLQICKLLMNQSAIAGIGNIYRAEILFRNRVNPFLTSNTIPEDTLKRIWDDWTVL
LKCGIKTGQMITMNKAPGHWVYNHHKSPCSVCFHPIDCVNVAGRKLYWCVVCQA
NT seq 885 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaggggcattcaatccaccgttctgcaattcaatttgagcataatttcgttgga
aaaaaaatagggatttcttccccgcaggggaggttttcccccggtgcgcggctacttgac
aagcaaagaatgatatctgccaaagcatacggaaagcagctgcttctgggctttgaaaat
aaccggttcttgcaagttcatctggggatatacggcgcttggcaattctatgggaatata
tcctgcgcaccaactatattgcccggggcagaaggtattcaaagcattggtgcccccagg
cgattgaaggggccttgcataaccaagaacagcggctctacccccggggcatcttggaaa
gacctgatgtttaagcatcaggcccaggcaagagctaagctcattacagacaccgcaggg
gttcttctgagcggaccggcggtctgcaaagttttgacacccgaagaggcggatgagctt
atctcgcgacttggtccggatccggtcgtcaatccgatgggatacaaccgctttatcaaa
gcagctcgaaaaagcaacctccaaatatgcaagctactcatgaaccagtctgctatcgct
ggtatagggaatatataccgcgcggaaattctattcagaaatagagtaaacccatttctt
acttcgaacaccatcccggaagacaccttaaaaaggatatgggacgactggacagtcctg
ttaaaatgcggaataaaaaccggacagatgatcactatgaataaggcgccgggacactgg
gtttacaatcaccacaagtccccatgttcagtctgctttcacccaatagattgcgtaaac
gtggcaggcagaaagctgtactggtgtgtcgtctgtcaagcgtag

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