KEGG   Tropheryma whipplei TW08/27: TW374Help
Entry
TW374             CDS       T00117                                 

Gene name
nei
Definition
endonuclease VIII (EC:3.2.-.-)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
tws  Tropheryma whipplei TW08/27
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:tws00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    TW374 (nei)
Enzymes [BR:tws01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     TW374 (nei)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     TW374 (nei)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
406503..407387
Genome map
AA seq 294 aa AA seqDB search
MPEGHSIHRSAIQFEHNFVGKKIGISSPQGRFSPGARLLDKQKMISAKAYGKQLLLGFEN
NRFLQVHLGIYGAWQFYGNISCAPTILPGAEGIQSIGAPRRLKGPCITKNSGSTPGASWK
DLMFKHQAQARAKLITDTAGVLLSGPAVCKVLTPEEADELISRLGPDPVVNPMGYNRFIK
AARKSNLQICKLLMNQSAIAGIGNIYRAEILFRNRVNPFLTSNTIPEDTLKRIWDDWTVL
LKCGIKTGQMITMNKAPGHWVYNHHKSPCSVCFHPIDCVNVAGRKLYWCVVCQA
NT seq 885 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaggggcattcaatccaccgttctgcaattcaatttgagcataatttcgttgga
aaaaaaatagggatttcttccccgcaggggaggttttcccctggtgcgcgtctacttgac
aagcaaaaaatgatatctgccaaagcatacggaaagcagctgcttctgggctttgaaaat
aaccggttcttgcaagttcatctggggatatacggcgcttggcaattctatgggaatata
tcctgcgcaccaactatattgcccggggcagaaggtattcaaagcattggtgcccccagg
cgattgaaggggccttgcataaccaagaacagcggctctacccccggggcatcttggaaa
gacctgatgtttaagcatcaggcccaggcaagagctaagctcattacagacaccgcaggg
gttcttctgagcggaccggcggtctgcaaagttttgacacccgaagaggcggatgagctt
atctcgcgacttggtccggatccggtcgtcaatccgatgggatacaaccgctttatcaaa
gcagctcgaaaaagcaacctccaaatatgcaagctactcatgaaccagtctgctatcgct
ggtatagggaatatataccgcgcggaaattctattcagaaatagagtaaacccatttctt
acctcgaacaccatcccggaagacaccttaaaaaggatatgggacgactggacagtcctg
ttaaaatgcggaataaaaaccggacagatgatcactatgaataaggcgccgggacactgg
gtttacaatcaccacaagtccccatgttcagtctgctttcacccaatagattgcgtaaac
gtggcaggcagaaagctgtactggtgcgtcgtctgtcaagcgtag

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