KEGG   Tropheryma whipplei TW08/27: TW810
Entry
TW810             CDS       T00117                                 
Name
(GenBank) putative RNA nucleotidyltransferase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
tws  Tropheryma whipplei TW08/27
Pathway
tws03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tws00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TW810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tws03019]
    TW810
Enzymes [BR:tws01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     TW810
Messenger RNA biogenesis [BR:tws03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     TW810
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd HD tRNA_NucTran2_2
Other DBs
NCBI-ProteinID: CAD67469
Position
918020..919456
AA seq 478 aa
MKYTSMFKLALSRLQKLSHEDSVLALTAAFCAKNYELALVGGPVRDCFLDRPVVDLDFAT
NATPQETLRLVKPISSGCWTTGARYGTVSARVKGRVVEITTYRSDNYSANTRKPKVSFGG
SLEEDLIRRDFTVNAMAFRVPSGQLVDISSGLQDIANKRLATPIKPELSFADDPLRMLRA
ARLSSQLGFKISENSLLAMKDCAKRLKIVSAERVRGEFEKLLCCADPTGSLRVLVNTGLI
NHFLPEISALRLEIDEHFHHKDVYEHSLIVLRQAIKLEQERFRNGPDLVLRLAALMHDIG
KPATRRKHPDGSVTFYHHDTVGAKMASKRLAAMRFDKNVIFAVTRLIQLHLRFFGYGDQS
WTDSAVRRYVRDAGPQLERLHILTRADVTTRNQNKARRLRAAYDNLEERIAKLREQEELD
AIRPELNGEEIMSLLDLKPGKEVGVAYKYLLDLRLDNGPIGKQESARKLLLWWKSERR
NT seq 1437 nt   +upstreamnt  +downstreamnt
gtgaagtatacaagcatgtttaaattagcgctatcgcgcctgcaaaaactgtcacatgaa
gactcggtccttgctcttacagcggcattctgtgccaagaattatgagcttgccctggtc
ggtggaccggttagagattgtttccttgacaggccggttgttgaccttgattttgccaca
aacgcaacgccgcaggagactctgaggcttgtaaaacccatttcctcgggctgttggaca
acaggggcacgctacggaaccgtttctgctcgcgtgaagggcagggtggttgagataacc
acatatcgaagcgacaactactcggcgaatacccgcaaacctaaggtaagttttggaggc
tcccttgaagaagacttaattcggcgcgacttcacggtcaacgcaatggcattcagggtg
cctagcgggcaactggttgatataagttccggtcttcaagacattgccaacaaaagactt
gcgacccctataaaaccggaactatcttttgcagacgaccccctgcgcatgttgagggct
gctcgattgtcttctcaattgggtttcaaaatatcggagaacagccttcttgccatgaaa
gactgtgccaagaggttaaaaatcgtctcggcagagcgtgtaaggggtgagtttgaaaaa
ctgctttgctgtgcagatcccacgggcagtttacgggtgctcgtcaataccggtttgatt
aatcattttttgccagagatatccgctctgcgcttggaaattgatgagcacttccaccac
aaagatgtgtatgaacattccctcattgttctccgccaagcaatcaaattggaacaggag
cgcttccgtaatgggcccgacctggtcctgcgtctggcggcgctcatgcacgatattggc
aagcctgcaacccgtcgtaaacatccggacgggtctgtgaccttttatcaccacgatacg
gttggtgcaaaaatggcctcgaagcgcctagcggcaatgcgttttgacaagaatgttatc
tttgcggtcactcgcctgattcagcttcatcttcgtttttttggctacggtgaccaatcg
tggaccgactccgctgtgaggcgctatgtgagagatgctggcccccaactggagcgccta
catatactgacccgcgccgatgttaccaccagaaaccagaataaagctcggcgcctcagg
gccgcctatgacaacctcgaagagcgaattgccaaacttcgagaacaagaagagttagac
gcgataagacctgaattaaatggtgaagagattatgagcctcctagatctaaagcctggc
aaagaagttggggtggcctataaataccttctcgacctcaggctggacaatggacccatt
ggcaaacaggaatcagctagaaagctcttattgtggtggaaatctgagaggcggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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