KEGG   Thalassospira xiamenensis: TH3_02060
Entry
TH3_02060         CDS       T03639                                 
Name
(GenBank) tRNA nucleotidyltransferase/poly(A) polymerase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
txi  Thalassospira xiamenensis
Pathway
txi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:txi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TH3_02060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:txi03019]
    TH3_02060
Enzymes [BR:txi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     TH3_02060
Messenger RNA biogenesis [BR:txi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     TH3_02060
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd tRNA_NucTran2_2
Other DBs
NCBI-ProteinID: AJD50538
UniProt: A0A0B4XVQ6
Position
452503..453813
AA seq 436 aa
MTELTATGHLQPYGVMTHPDTARVFDAIAAHGGTARFVGGIVRDALLKRDLIDVDIACDL
KPEETVIALEKAGLKVIPTGLKHGTVTAITDASAYEITTLRIDVTTDGRHAEVAFTDSWL
GDARRRDFTFNALYCDLDGTIYDPFDGETDLREGRVRFIGIAEDRIEEDYLRILRFFRFQ
AWFGRPPLDPIGAEACRKGAQGLRDISPERIRDEMFKLLRSRSPAATIKEMIGFNVLPVI
LPDLVDTPRLRMMEWLDSTALADSAIKPDPLRRLAALYRAPENANDDLQAAAEFGRALRL
SNDEADRFAAMISNANLISADLSEDTIRRDLYRIGPDAFRDAVLIAWAARAAIPPRASSA
ENRDWQALLQAATDWVNVKMPIQGRDLLAAGLVTAGPTMGWLLEMAEEYWIANAFAPGRE
ELMNYLAAQNAAKLQE
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgaccgaactgacagcaaccgggcatctgcagccctacggggtgatgacgcatcccgac
acagcacgtgtatttgatgcgattgcagcacatggtggcacggcccgctttgttggcggg
atcgtacgcgatgcgcttttgaaacgtgatctgatcgatgtggatatcgcgtgcgacctg
aaaccggaagaaaccgttattgcccttgaaaaggcggggctcaaagttatccccaccggg
cttaaacacggcacggtgacggcgataaccgatgcatcggcctatgaaatcacgacgctg
cgcattgatgtcacgaccgatggccgtcatgcagaagtcgcctttactgatagctggctt
ggcgatgccagacgtcgtgattttacattcaatgcgctttattgcgatctggacgggacg
atctatgatccgtttgacggtgaaacggatttgcgcgaaggccgggtacgtttcatcggt
attgccgaagaccggattgaagaagactaccttcgtattctgcgatttttccggtttcag
gcatggtttggtcgaccaccacttgacccgattggtgcggaagcatgccgcaagggggcg
caagggcttcgggatatttcacccgaacgtattcgcgatgagatgtttaaattgctgcgt
tcacgcagcccggcagccacgattaaggaaatgatcggctttaatgtgttgccggttatc
ttgccggatttggtagatacaccgcgacttcgcatgatggaatggcttgatagtacggct
cttgccgattctgcaatcaagcccgatccattgcgtcgtctggcggccttgtaccgtgcg
ccggaaaatgcgaatgatgatttgcaggcggcagccgaatttggcagggcattgcgattg
tccaacgacgaagccgaccgtttcgcggcaatgatttccaatgccaatcttatcagtgcc
gatttgtccgaggatacaatccgacgtgatctttatcgcatcgggccggatgcctttcgc
gatgcggttttgattgcctgggcggcgcgtgcggcgatcccgccacgggccagcagtgcc
gaaaaccgcgattggcaggctttgttgcaggcggcaacagactgggtcaatgttaaaatg
ccaattcaggggcgggatcttctcgcagcgggtcttgtgaccgccgggccgacaatgggc
tggttgttggagatggcggaagaatactggattgcaaatgcctttgcgcccggtcgcgag
gaactgatgaattatttggcggcacagaatgccgcaaagttgcaggagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (38)   

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