KEGG   Ustilago maydis: UMAG_06195
Entry
UMAG_06195        CDS       T01021                                 
Name
(RefSeq) hypothetical protein
  KO
K14568  rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
Organism
uma  Ustilago maydis
Pathway
uma03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:uma00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    UMAG_06195
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:uma03009]
    UMAG_06195
Enzymes [BR:uma01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.260  rRNA small subunit pseudouridine methyltransferase Nep1
     UMAG_06195
Ribosome biogenesis [BR:uma03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    UMAG_06195
SSDB
Motif
Pfam: EMG1 DAB2P_C
Other DBs
NCBI-GeneID: 23565870
NCBI-ProteinID: XP_011392564
UniProt: A0A0D1DT97
Position
22:complement(148192..149361)
AA seq 389 aa
MSSASSAASDSEDDRMTTHSAPATTYRPIAPLPHSPRATSPSSLSTADDHVTRSTTATHT
ATSAIDSIQARLQSSDTASIASSHSNSISSSSSSKPPMRHALPPKPVTTMPSSTSNGVAS
SSSSSSAAAAAKANTAKRSRVDSSLVPQIPKVPKTAVEKENTPRLIVVLEQACLETYKVS
TGSASRSSSGSGGRNKDGGDKYALLNCDDHQRVLAKMGRDIAEARPDITHQCLLTLLDSP
LNKAGLLQVYIHTAKGVLIEVNPHVRIPRTFKRFSGLMVQLLHKLSIRSMGGSEKLLRVI
KNPVTDHFPANTHKITLSFDSPVQRLANYLPTIPENHSIAVFVGAMAHGKDNFADGVVDE
KISISEYSLSASVACGKFCCALEDFWGVV
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgtcttcagcttcatccgcagcctcggattcagaagatgaccgaatgacgacgcactca
gcccccgctaccacgtatcgacctatcgcaccccttccacattcgcctcgtgctacgtcc
ccctcgtctctctccacagcagacgaccatgtcactcgcagcactactgccacccacacc
gccacctcggcgattgattccattcaagctcgtctgcagtccagcgacactgcctcgatc
gcatcgtcccactccaactcgatctcttcttcctcgtcttccaagccgccgatgcgtcac
gctcttccacccaaacccgtcactacgatgccttcgtccacctcgaacggcgtcgcttct
tcgtcctcctcttcgtcagcagcggcggctgccaaggccaacacggccaaacgctcgcgt
gtcgactcttcgctcgtaccccagattcccaaggtccccaagacagccgtggaaaaggag
aacacgcctcgactgattgttgtcctcgaacaggcgtgtctcgagacgtacaaagtttcc
actggttccgcttcgcgcagctcatccggctccggtggcaggaacaaagatggcggggac
aagtacgctttgctcaactgcgatgatcaccaacgcgtactcgcaaagatgggccgcgac
atcgccgaagctcgtcctgacatcactcaccagtgcctcttgacgctgctcgactctccg
ctcaacaaggcggggttgcttcaagtctacatccacaccgccaagggcgtcttgatcgag
gtcaacccgcacgttaggattccaaggacgtttaagcgcttttccggcctgatggttcag
ctgctgcacaaactcagcatccgttccatgggcggctcggaaaagctgcttcgcgtcatc
aagaacccggtcacggatcactttcctgccaacacgcacaagatcaccctctcattcgat
tcacccgtccaaagattggccaactacctaccgacgattccggaaaaccacagcatcgcc
gtcttcgtaggcgccatggctcatggtaaggacaactttgccgatggcgtagtcgacgag
aagatcagtatctccgagtactccttaagcgccagtgtggcgtgtggaaagttttgctgt
gcattggaggatttctggggcgtggtgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (34)   

Download RDF
DBGET integrated database retrieval system