ID A0A022PYT5_ERYGU Unreviewed; 1829 AA.
AC A0A022PYT5;
DT 11-JUN-2014, integrated into UniProtKB/TrEMBL.
DT 11-JUN-2014, sequence version 1.
DT 24-JAN-2024, entry version 35.
DE RecName: Full=S1 motif domain-containing protein {ECO:0000259|PROSITE:PS50126};
GN ORFNames=MIMGU_mgv1a000093mg {ECO:0000313|EMBL:EYU20674.1};
OS Erythranthe guttata (Yellow monkey flower) (Mimulus guttatus).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Lamiales; Phrymaceae; Erythranthe.
OX NCBI_TaxID=4155 {ECO:0000313|EMBL:EYU20674.1, ECO:0000313|Proteomes:UP000030748};
RN [1] {ECO:0000313|EMBL:EYU20674.1, ECO:0000313|Proteomes:UP000030748}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DUN x IM62 {ECO:0000313|Proteomes:UP000030748};
RX PubMed=24225854; DOI=10.1073/pnas.1319032110;
RA Hellsten U., Wright K.M., Jenkins J., Shu S., Yuan Y., Wessler S.R.,
RA Schmutz J., Willis J.H., Rokhsar D.S.;
RT "Fine-scale variation in meiotic recombination in Mimulus inferred from
RT population shotgun sequencing.";
RL Proc. Natl. Acad. Sci. U.S.A. 110:19478-19482(2013).
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|ARBA:ARBA00004604}.
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DR EMBL; KI632259; EYU20674.1; -; Genomic_DNA.
DR STRING; 4155.A0A022PYT5; -.
DR eggNOG; KOG1070; Eukaryota.
DR Proteomes; UP000030748; Unassembled WGS sequence.
DR GO; GO:0005730; C:nucleolus; IBA:GO_Central.
DR GO; GO:0032040; C:small-subunit processome; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR CDD; cd05694; S1_Rrp5_repeat_hs2_sc2; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 9.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR003107; HAT.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR045209; Rrp5.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR008847; Suf.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR PANTHER; PTHR23270; PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5; 1.
DR PANTHER; PTHR23270:SF10; PROTEIN RRP5 HOMOLOG; 1.
DR Pfam; PF00575; S1; 5.
DR Pfam; PF05843; Suf; 1.
DR SMART; SM00386; HAT; 5.
DR SMART; SM00316; S1; 15.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 12.
DR SUPFAM; SSF48452; TPR-like; 2.
DR PROSITE; PS50126; S1; 13.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000030748};
KW rRNA processing {ECO:0000256|ARBA:ARBA00022552}.
FT DOMAIN 37..121
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 137..201
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 310..370
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 401..468
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 488..557
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 572..644
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 664..733
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 777..841
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 966..1042
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 1066..1137
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 1162..1236
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 1270..1339
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 1360..1430
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT REGION 1526..1563
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1541..1563
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1829 AA; 202956 MW; 5460334812EAF1C3 CRC64;
MSLTSPEDDL GSLFGDGIKG KLPRFANKIT LKNVSPGMKL WGVIAEVNEK DIVVSLPGGL
RGLVRACDAF DPVFGDEVKG DLENSFLSRI YHEGQLVSCI VLQVDDDRKE ITKRKIWLSL
RLSSLHRSLT LDAIQEGMVL SAYVKSIEDH GFILHFGLSA FEGFMPKHNQ SEMRKIEVGQ
FLQGTVKSVE RARKVVHLSS DPDMVSRSVT KEVKGISIDL LVPGMMVNAR VQSTLENGVM
FSFLTYFTGT VDLFNLDKMF SSSTWKNDYS KNMKFNARIL FIDPSSRAVG LTLNPHLVNN
KAPPSLVKVG DIFDQSKVVR VDKGSGLLLQ IPTLPVPTPA YVNVSDIADK EVGKLDKSFK
EGSLVRARVL GYRHLEGLAT GILKTSAFEG LVFTHSDVKP GMVVKAKVIA VDSFGSIVQF
ASGVKALCPL RHMSEFEIAK PRKKFKAGVE LVFRVLGCKS KRITVTHKKT LVKSKLEILS
SFADATDGLV THGWITKIEK HGCFVRFYNG VQGFAPRSEL GLGQASDIHS MYHVEQVVKC
RVVKCIPSSH RISLSFNITP TRASEDENVK PGSLVSGLVV RTTPETVIVD INASSGMKGT
ISLEHLADNQ GLAASLISLI KPGHHFDELL VLDIEGNNIV LTAKYSLVNS TQQLPIDVSQ
LSCHSVVHGY ICNIIETGCF VRFIGRLTGF APKSKAIDDR RSDLSEVFYV GQSVRSNIVD
VSSDVGRITL SLKQSLCCST DAAFIQEYFL LEEKIAKLQG LDREGSELRW VDAFSICNII
EGKVHEIKDH GVVISFEEYN DVFGFISHHQ LAGTSMKKNS AIQAAVLDVS KIDRVVDLSL
KPEFINRSKK ESSTIKALKK KRKREHKDLE VNQIVNAIVE IVKENYLVLS VPDYNFTIGY
ASLTDYNTQK LPHKQFTHGQ SVSATVMALP APATCGKLLL LLKHLGDGVD TSSSKRARKK
SSYDVGSLIQ AEITEIKPLE LKVKFGSGFY GRIHITEVTD DNSAESPFSD YRIGQTLASR
IVSKGSKTKN MKGGHGCELS IKPSLLKGSG EPDEGLPSEE FNYTYGQRVS GYVYKVDSDW
AWLTISRDVN AQLYILDSSC EPCELAEFQN RLRVGKALSG HIITVNKEKK LLRLVMHAPA
DACGELNEKN SDRRLTCHLV EGSTVGGRIS KILPGIGGLL VQIDQHQYGK VHFTELTDSW
VSNPLSGYQE GQFVKCKVLE ITRGVMGVVH VDLSLRSASD ASRDLGSTEL NGGMHTSIQH
VDKITDLHPD MVVQGYVKNV SSKGCFIMLS RKIDARILIS KLSDNFVENP ENEFPIGKLV
VGKVLSVEPL SKRVEVTLRT SSALKEPKSG NNPVDHISVG DIISGRIKRI QPYGLFISID
HTNAVGLCHV SELSDDHIED LETQFKAGEK VTAKVLTVDK ERNRISLGLK NSYFKDEEVQ
TSPGQSHDSA IGINDTIMLD EPTVTSQRNS ASMQMTNNES DNGHQPILAD AESRALVPPL
EVPLDDMETS DIEGDVGQTL VPVTNADTTA GEKKKRGAKR KAREEREQEI RAAEERQLEK
DVPRTTDEFE KLIKSSPNNS YPWIKYMAFM LSLADIEKAR SIAELALKRI SSQEESEKLN
IWVAYLNLEN EYGNPPEEAV KKIFVRALQH CDSKKVHLAL LEMYERTEQH KLADELLGKM
VRNLGNSCKV WLRRIQSLVN RKSDGVQPVV TDAVKRLPKH KHIKFLSKTA ILEFKCGVPD
RGRTLFESIL RQHPKRTDLW SIYLDQEIKL GEADMIRALF ERAISLSLPL KKMKFLFNKY
LAYEKSTGDE KRIESVKAKA IEYAENNLA
//
