ID A0A023Y3I6_9GAMM Unreviewed; 496 AA.
AC A0A023Y3I6;
DT 09-JUL-2014, integrated into UniProtKB/TrEMBL.
DT 09-JUL-2014, sequence version 1.
DT 27-MAR-2024, entry version 46.
DE SubName: Full=Fis family transcriptional regulator {ECO:0000313|EMBL:AHY59093.1};
GN ORFNames=DX03_10460 {ECO:0000313|EMBL:AHY59093.1};
OS Stenotrophomonas rhizophila.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales;
OC Xanthomonadaceae; Stenotrophomonas.
OX NCBI_TaxID=216778 {ECO:0000313|EMBL:AHY59093.1, ECO:0000313|Proteomes:UP000025222};
RN [1] {ECO:0000313|EMBL:AHY59093.1, ECO:0000313|Proteomes:UP000025222}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 14405 {ECO:0000313|Proteomes:UP000025222};
RA Alavi P., Starcher M.R., Thallinger G., Zachow C., Mueller H., Berg G.;
RT "Is there a border between beneficial and pathogenic bacteria?";
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP007597; AHY59093.1; -; Genomic_DNA.
DR RefSeq; WP_038688464.1; NZ_CP007597.1.
DR AlphaFoldDB; A0A023Y3I6; -.
DR STRING; 216778.DX03_10460; -.
DR GeneID; 61476344; -.
DR HOGENOM; CLU_000445_0_7_6; -.
DR Proteomes; UP000025222; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR010518; FleQ.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR PANTHER; PTHR32071:SF121; PTS-DEPENDENT DIHYDROXYACETONE KINASE OPERON REGULATORY PROTEIN-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF06490; FleQ; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 138..366
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 496 AA; 53850 MW; 6908BAE1730F6132 CRC64;
MSESRILVLD SDAVRAERTV ALLEFMDFNP RWVADAADFD ITRQRSTDWM AVIIGGLEAG
ARSDALFAWA GQGALPPPVM LIDGDAPRFA QQHGLHEANV WPLEAPLRHA QMEALLRRAS
LKRLDAEHQA GAVQEQGPTG EGAAVSALRL MIEQVAAFDT TVLVLGESGT GKEVVSRSIH
QRSPRRDGPF VAINCGAIPA ELLESELFGH EKGAFTGALS ARKGRFEMAE GGTLLLDEIG
DMSLPMQVKL LRVLQERSFE RVGGNQTIRC NVRVIAATHR DLESRIADGK FREDLFYRLN
VFPIDVPALR ERSEDLPALV TTIAAQLART GRGEVRFSAE ALQALASYEW PGNVRELTNL
VERLAVLHPG GTVRVQDLPA RYRGDFSASV PAPVVAPAPV ADERLDLRSF SFHVPTPGTG
AAADAGPAAR APALPDAGLD LRNHMANIEL NLINEALERT QGVVAHAAQL LGLRRTTLVE
KLRKYGIERD QAELAG
//
