ID A0A024G9S1_9STRA Unreviewed; 887 AA.
AC A0A024G9S1;
DT 09-JUL-2014, integrated into UniProtKB/TrEMBL.
DT 09-JUL-2014, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE RecName: Full=BED-type domain-containing protein {ECO:0000259|PROSITE:PS50808};
GN ORFNames=BN9_044150 {ECO:0000313|EMBL:CCI43631.1};
OS Albugo candida.
OC Eukaryota; Sar; Stramenopiles; Oomycota; Albuginales; Albuginaceae; Albugo.
OX NCBI_TaxID=65357 {ECO:0000313|EMBL:CCI43631.1, ECO:0000313|Proteomes:UP000053237};
RN [1] {ECO:0000313|EMBL:CCI43631.1, ECO:0000313|Proteomes:UP000053237}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Ac Nc2 {ECO:0000313|EMBL:CCI43631.1,
RC ECO:0000313|Proteomes:UP000053237};
RA Gardiner A., Kemen E., Schultz-Larsen T., MacLean D., Van Oosterhout C.,
RA Jones J.D.G.;
RT "Recombination and specialization in a pathogen metapopulation.";
RL Submitted (MAY-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCI43631.1}.
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DR EMBL; CAIX01000052; CCI43631.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A024G9S1; -.
DR STRING; 65357.A0A024G9S1; -.
DR InParanoid; A0A024G9S1; -.
DR OrthoDB; 89701at2759; -.
DR Proteomes; UP000053237; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR CDD; cd14832; AP4_sigma; 1.
DR Gene3D; 3.30.450.60; -; 1.
DR InterPro; IPR022775; AP_mu_sigma_su.
DR InterPro; IPR008906; HATC_C_dom.
DR InterPro; IPR011012; Longin-like_dom_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR003656; Znf_BED.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR PANTHER; PTHR46169; DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A; 1.
DR PANTHER; PTHR46169:SF15; DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A; 1.
DR Pfam; PF01217; Clat_adaptor_s; 1.
DR Pfam; PF05699; Dimer_Tnp_hAT; 1.
DR Pfam; PF02892; zf-BED; 1.
DR SMART; SM00614; ZnF_BED; 1.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF64356; SNARE-like; 1.
DR PROSITE; PS50808; ZF_BED; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000053237};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00027}.
FT DOMAIN 193..267
FT /note="BED-type"
FT /evidence="ECO:0000259|PROSITE:PS50808"
SQ SEQUENCE 887 AA; 100149 MW; C56DE6C3BDE5024B CRC64;
MIKFVLMVNK QGQTRLAQYY DFLSIQERVA LEAEIIRKCL SRNENQCSFV EYRGYKVIYR
RYASLFFIVG VQNDDSENEL GILEFIHALV ETMDKYFESV CELDIMFNLE KAHFILDEMA
TFTNSSLAFH SIAGSGGFYH QAAAISGINR MKIEAQASTI GEVSKLETIE TLHIKQADEM
TSFHTDEPVR KKKLTSVVWE TFTPISSSGL RDGVIDSAKC NLCHKTFSTR HGTSSMMRHA
KRHAEIAATL TESTGGIRRH KRHISNPQTN LTDKKMIIGP QHRKDGTSHG SVSFETESVG
GIKRQKLRNL NGALIDWMIH DGQDATLLQC DNFLDIFTAI GIKPTFPSVD MFSKIVERRY
FASFHRMKEY LSRSTTGRIA FSCDTWSGRT EKEYMGIHIY WINADWECKT MQIGLEAYPT
TRNAYFLSDL LYHVLQNQWG IANRLLCGVL PMCDEASVGM GFLREKIKVL IGTDSIASNW
NITCLGHLIH VGMLAGLKEI EPEILKLRSL LSLLQSVMET HEHLTNKASD MVLPQIADQY
QLPNLDTPIH WRSTIAMILN SIKVKDVINT LYGDTSNGMN LFLLDEIEWD LLFWTATFFQ
KCIQMATCQS DQKHISLSTS LNVCKAIIGL CDSTASSAME LSDEVCTKIQ AACVKVKVSV
ESYQTSASSF FTLAKILDPR FSNESIDKAE KKEFLREMLH KNVHDTLSNS QAHAHSERHE
SSSAYSTFDR LLDIGEGISD YAMDGDEVDR FFDATLIRDK RSDPFLWWKS NETRFPNLAK
LARDILSIPA TAIPSGAIFT EAATSRSIGS PTTAGERSRT FKYASLERAW QLERQLIGGK
RRQDTFPFQE ITELDVPATL DTTLAVSSIH SAVMQSTTVK ATYEESI
//
