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Database: UniProt
Entry: A0A059CA56_EUCGR
LinkDB: A0A059CA56_EUCGR
Original site: A0A059CA56_EUCGR 
ID   A0A059CA56_EUCGR        Unreviewed;       706 AA.
AC   A0A059CA56;
DT   09-JUL-2014, integrated into UniProtKB/TrEMBL.
DT   09-JUL-2014, sequence version 1.
DT   24-JAN-2024, entry version 35.
DE   RecName: Full=Smr domain-containing protein {ECO:0000259|PROSITE:PS50828};
GN   ORFNames=EUGRSUZ_E03880 {ECO:0000313|EMBL:KCW75129.1};
OS   Eucalyptus grandis (Flooded gum).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus.
OX   NCBI_TaxID=71139 {ECO:0000313|EMBL:KCW75129.1, ECO:0000313|Proteomes:UP000030711};
RN   [1] {ECO:0000313|Proteomes:UP000030711}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. BRASUZ1 {ECO:0000313|Proteomes:UP000030711};
RX   PubMed=24919147; DOI=10.1038/nature13308;
RA   Myburg A.A., Grattapaglia D., Tuskan G.A., Hellsten U., Hayes R.D.,
RA   Grimwood J., Jenkins J., Lindquist E., Tice H., Bauer D., Goodstein D.M.,
RA   Dubchak I., Poliakov A., Mizrachi E., Kullan A.R., Hussey S.G., Pinard D.,
RA   van der Merwe K., Singh P., van Jaarsveld I., Silva-Junior O.B.,
RA   Togawa R.C., Pappas M.R., Faria D.A., Sansaloni C.P., Petroli C.D.,
RA   Yang X., Ranjan P., Tschaplinski T.J., Ye C.Y., Li T., Sterck L.,
RA   Vanneste K., Murat F., Soler M., Clemente H.S., Saidi N., Cassan-Wang H.,
RA   Dunand C., Hefer C.A., Bornberg-Bauer E., Kersting A.R., Vining K.,
RA   Amarasinghe V., Ranik M., Naithani S., Elser J., Boyd A.E., Liston A.,
RA   Spatafora J.W., Dharmwardhana P., Raja R., Sullivan C., Romanel E.,
RA   Alves-Ferreira M., Kulheim C., Foley W., Carocha V., Paiva J., Kudrna D.,
RA   Brommonschenkel S.H., Pasquali G., Byrne M., Rigault P., Tibbits J.,
RA   Spokevicius A., Jones R.C., Steane D.A., Vaillancourt R.E., Potts B.M.,
RA   Joubert F., Barry K., Pappas G.J., Strauss S.H., Jaiswal P.,
RA   Grima-Pettenati J., Salse J., Van de Peer Y., Rokhsar D.S., Schmutz J.;
RT   "The genome of Eucalyptus grandis.";
RL   Nature 510:356-362(2014).
CC   -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC       {ECO:0000256|ARBA:ARBA00007626}.
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DR   EMBL; KK198757; KCW75129.1; -; Genomic_DNA.
DR   RefSeq; XP_010057810.1; XM_010059508.2.
DR   RefSeq; XP_010057811.1; XM_010059509.2.
DR   RefSeq; XP_018730473.1; XM_018874928.1.
DR   AlphaFoldDB; A0A059CA56; -.
DR   STRING; 71139.A0A059CA56; -.
DR   EnsemblPlants; KCW75129; KCW75129; EUGRSUZ_E03880.
DR   GeneID; 104445606; -.
DR   Gramene; KCW75129; KCW75129; EUGRSUZ_E03880.
DR   KEGG; egr:104445606; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   InParanoid; A0A059CA56; -.
DR   OMA; RPWQAKK; -.
DR   OrthoDB; 904281at2759; -.
DR   Proteomes; UP000030711; Unassembled WGS sequence.
DR   GO; GO:0009570; C:chloroplast stroma; IBA:GO_Central.
DR   GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR   GO; GO:0042134; F:rRNA primary transcript binding; IBA:GO_Central.
DR   GO; GO:0045727; P:positive regulation of translation; IBA:GO_Central.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR033443; PPR_long.
DR   InterPro; IPR002625; Smr_dom.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 7.
DR   PANTHER; PTHR47447; OS03G0856100 PROTEIN; 1.
DR   PANTHER; PTHR47447:SF12; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN ATP4 HOMOLOG, CHLOROPLASTIC; 1.
DR   Pfam; PF01535; PPR; 1.
DR   Pfam; PF12854; PPR_1; 1.
DR   Pfam; PF13041; PPR_2; 1.
DR   Pfam; PF13812; PPR_3; 1.
DR   Pfam; PF17177; PPR_long; 1.
DR   SMART; SM00463; SMR; 1.
DR   SUPFAM; SSF81901; HCP-like; 2.
DR   PROSITE; PS51375; PPR; 9.
DR   PROSITE; PS50828; SMR; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000030711};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          180..214
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          215..249
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          250..284
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          285..319
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          320..354
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          355..389
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          390..424
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          426..460
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          461..495
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   DOMAIN          608..692
FT                   /note="Smr"
FT                   /evidence="ECO:0000259|PROSITE:PS50828"
FT   REGION          58..96
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        81..96
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   706 AA;  78859 MW;  D0B3B53D1423AF99 CRC64;
     MEMAFHLCSS PSSFLQDRHY TRSSLPCPPS SKLRSFIFPR GPDFLSLRSK PSCRATAQVS
     VDGAVAQETR DPVPESPDSP NPDGKTGSSS RSYIWVNPNS PRASKLRQQS YDARYGLLVN
     VAESLNSCGS SEDDVFGVLR GLGDKILEQD AVVVLNKMAN AENAVLALKY FQQRIRPRRE
     VIMYNVTLKV FRKCRDLERA EKLFAKMLER GVKPDNVTFS TIIGCARMCS LPTEAIEWFN
     KMPQFGCNPD DVTYSAMIDA YGRAGNVNMA LSLYDRARTE KWRVDVGTFS TLIKIYGQTK
     NFDGCLNVYE EMKALGVKPN LVIYNTLLDA MGRAKRPWQA KILYKELISN GFTPSFATYA
     ALIRAYGKAR YSEDALAIYR EMKDKGMQLN VILYNTLLAM CADVGYMDEA VEIFEEMKSS
     GTCQPDSWTF SSLITIYSCS GKVSKAEAML DQMLEAGFEP NLFVLTSLIQ CYGKTQRADD
     VVSTFNRLLE LAITPDDRFC GCLLNVMTQT PSEDLDKLIY CIEKANPKLG NVVKLLIKEH
     DSELNFKEEA LELFKSINAD VKKAYCNCLI DLCVNANLLE KACELLDLGL TLEIYTDMQS
     RSATQWSLHL KSLSLGAALT ALHVWINDLS KALQSGEELP PLLGINTGHG KHKYSDKGLA
     SVFESHLKEL NAPFHEAPDK VGWFLTTKIA AQSWLESRSS LELEAS
//
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