ID A0A059CA56_EUCGR Unreviewed; 706 AA.
AC A0A059CA56;
DT 09-JUL-2014, integrated into UniProtKB/TrEMBL.
DT 09-JUL-2014, sequence version 1.
DT 24-JAN-2024, entry version 35.
DE RecName: Full=Smr domain-containing protein {ECO:0000259|PROSITE:PS50828};
GN ORFNames=EUGRSUZ_E03880 {ECO:0000313|EMBL:KCW75129.1};
OS Eucalyptus grandis (Flooded gum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus.
OX NCBI_TaxID=71139 {ECO:0000313|EMBL:KCW75129.1, ECO:0000313|Proteomes:UP000030711};
RN [1] {ECO:0000313|Proteomes:UP000030711}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BRASUZ1 {ECO:0000313|Proteomes:UP000030711};
RX PubMed=24919147; DOI=10.1038/nature13308;
RA Myburg A.A., Grattapaglia D., Tuskan G.A., Hellsten U., Hayes R.D.,
RA Grimwood J., Jenkins J., Lindquist E., Tice H., Bauer D., Goodstein D.M.,
RA Dubchak I., Poliakov A., Mizrachi E., Kullan A.R., Hussey S.G., Pinard D.,
RA van der Merwe K., Singh P., van Jaarsveld I., Silva-Junior O.B.,
RA Togawa R.C., Pappas M.R., Faria D.A., Sansaloni C.P., Petroli C.D.,
RA Yang X., Ranjan P., Tschaplinski T.J., Ye C.Y., Li T., Sterck L.,
RA Vanneste K., Murat F., Soler M., Clemente H.S., Saidi N., Cassan-Wang H.,
RA Dunand C., Hefer C.A., Bornberg-Bauer E., Kersting A.R., Vining K.,
RA Amarasinghe V., Ranik M., Naithani S., Elser J., Boyd A.E., Liston A.,
RA Spatafora J.W., Dharmwardhana P., Raja R., Sullivan C., Romanel E.,
RA Alves-Ferreira M., Kulheim C., Foley W., Carocha V., Paiva J., Kudrna D.,
RA Brommonschenkel S.H., Pasquali G., Byrne M., Rigault P., Tibbits J.,
RA Spokevicius A., Jones R.C., Steane D.A., Vaillancourt R.E., Potts B.M.,
RA Joubert F., Barry K., Pappas G.J., Strauss S.H., Jaiswal P.,
RA Grima-Pettenati J., Salse J., Van de Peer Y., Rokhsar D.S., Schmutz J.;
RT "The genome of Eucalyptus grandis.";
RL Nature 510:356-362(2014).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; KK198757; KCW75129.1; -; Genomic_DNA.
DR RefSeq; XP_010057810.1; XM_010059508.2.
DR RefSeq; XP_010057811.1; XM_010059509.2.
DR RefSeq; XP_018730473.1; XM_018874928.1.
DR AlphaFoldDB; A0A059CA56; -.
DR STRING; 71139.A0A059CA56; -.
DR EnsemblPlants; KCW75129; KCW75129; EUGRSUZ_E03880.
DR GeneID; 104445606; -.
DR Gramene; KCW75129; KCW75129; EUGRSUZ_E03880.
DR KEGG; egr:104445606; -.
DR eggNOG; KOG4197; Eukaryota.
DR InParanoid; A0A059CA56; -.
DR OMA; RPWQAKK; -.
DR OrthoDB; 904281at2759; -.
DR Proteomes; UP000030711; Unassembled WGS sequence.
DR GO; GO:0009570; C:chloroplast stroma; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0042134; F:rRNA primary transcript binding; IBA:GO_Central.
DR GO; GO:0045727; P:positive regulation of translation; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR033443; PPR_long.
DR InterPro; IPR002625; Smr_dom.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 7.
DR PANTHER; PTHR47447; OS03G0856100 PROTEIN; 1.
DR PANTHER; PTHR47447:SF12; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN ATP4 HOMOLOG, CHLOROPLASTIC; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 1.
DR Pfam; PF13812; PPR_3; 1.
DR Pfam; PF17177; PPR_long; 1.
DR SMART; SM00463; SMR; 1.
DR SUPFAM; SSF81901; HCP-like; 2.
DR PROSITE; PS51375; PPR; 9.
DR PROSITE; PS50828; SMR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000030711};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 180..214
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 215..249
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 250..284
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 285..319
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 320..354
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 355..389
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 390..424
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 426..460
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 461..495
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 608..692
FT /note="Smr"
FT /evidence="ECO:0000259|PROSITE:PS50828"
FT REGION 58..96
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 81..96
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 706 AA; 78859 MW; D0B3B53D1423AF99 CRC64;
MEMAFHLCSS PSSFLQDRHY TRSSLPCPPS SKLRSFIFPR GPDFLSLRSK PSCRATAQVS
VDGAVAQETR DPVPESPDSP NPDGKTGSSS RSYIWVNPNS PRASKLRQQS YDARYGLLVN
VAESLNSCGS SEDDVFGVLR GLGDKILEQD AVVVLNKMAN AENAVLALKY FQQRIRPRRE
VIMYNVTLKV FRKCRDLERA EKLFAKMLER GVKPDNVTFS TIIGCARMCS LPTEAIEWFN
KMPQFGCNPD DVTYSAMIDA YGRAGNVNMA LSLYDRARTE KWRVDVGTFS TLIKIYGQTK
NFDGCLNVYE EMKALGVKPN LVIYNTLLDA MGRAKRPWQA KILYKELISN GFTPSFATYA
ALIRAYGKAR YSEDALAIYR EMKDKGMQLN VILYNTLLAM CADVGYMDEA VEIFEEMKSS
GTCQPDSWTF SSLITIYSCS GKVSKAEAML DQMLEAGFEP NLFVLTSLIQ CYGKTQRADD
VVSTFNRLLE LAITPDDRFC GCLLNVMTQT PSEDLDKLIY CIEKANPKLG NVVKLLIKEH
DSELNFKEEA LELFKSINAD VKKAYCNCLI DLCVNANLLE KACELLDLGL TLEIYTDMQS
RSATQWSLHL KSLSLGAALT ALHVWINDLS KALQSGEELP PLLGINTGHG KHKYSDKGLA
SVFESHLKEL NAPFHEAPDK VGWFLTTKIA AQSWLESRSS LELEAS
//