ID A0A061DI43_THECC Unreviewed; 641 AA.
AC A0A061DI43;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 24-JAN-2024, entry version 33.
DE SubName: Full=RNA-binding KH domain-containing protein, putative isoform 3 {ECO:0000313|EMBL:EOX91912.1};
GN ORFNames=TCM_000966 {ECO:0000313|EMBL:EOX91912.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOX91912.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOX91912.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
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DR EMBL; CM001879; EOX91912.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061DI43; -.
DR EnsemblPlants; EOX91912; EOX91912; TCM_000966.
DR Gramene; EOX91912; EOX91912; TCM_000966.
DR Proteomes; UP000026915; Chromosome 1.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd22459; KH-I_PEPPER_rpt1_like; 1.
DR Gene3D; 3.30.1370.10; K Homology domain, type 1; 4.
DR InterPro; IPR004087; KH_dom.
DR InterPro; IPR004088; KH_dom_type_1.
DR InterPro; IPR036612; KH_dom_type_1_sf.
DR PANTHER; PTHR10288; KH DOMAIN CONTAINING RNA BINDING PROTEIN; 1.
DR PANTHER; PTHR10288:SF269; RNA-BINDING KH DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00013; KH_1; 4.
DR SMART; SM00322; KH; 4.
DR SUPFAM; SSF54791; Eukaryotic type KH-domain (KH-domain type I); 4.
DR PROSITE; PS50084; KH_TYPE_1; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00117}.
FT DOMAIN 23..106
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 126..198
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 271..347
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 363..436
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT REGION 459..493
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 462..493
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 641 AA; 67888 MW; 1142A465EEF4758F CRC64;
MQNPYNRRRG RQGPPVTIVP LPGEVSFRII CHVSSIGGVI GNSGAVVSQL RRETSSRIHC
EEPVRGSAHR VILIVGSGSV ERRFSLGEGE ECDVSCAQEA MVRVFQRVWE VEAEREWGNA
CDGEDEEAYC GVLADTTQIG AVVGRGGNNI VRMRTETGAK IRILPPPPCG RKNDELIQIT
GGTLAVKKAL VAVSGCLQAC PPLDRESTPM SVPTEKPSRG TSPEPHIEFF PHLSSLLPPM
SANSVSASSN ATFSSMDADG DSNLDSNGTQ KEVVFRMLCS NGAAGAIIGK KGAIVRALQN
QTGASIMFAS PVTESGERVV TISALENLES WYSPAQNAVV LVFARSVEAD IGKGLPSGLS
KGSAVTVRLL VAKNLVSCLN DKGGRVLSEI VEVTGADVQI LDGDLTLDHS PEDVVQITGE
YKSVQNAIFQ VTSRLRHNLL PPEVLNEMRV RNCYGKVSDT GVPQAYQPTS LSSDTDQGPN
LAQRTQPGLS DNTAGPLPFK LQPQQLQTTG NGCTVATQDA ERGSTTFGGS LDLERSLDFL
LPSEVLNEVG GRSPCKGGSE TTSGLLQSLG LSLDSDQENA LTRAVGNLGL SNNVGCPPKS
PLLETVRRGH GLANAEGTGG LELERSVLHK NKIKAVSFCC C
//
