ID A0A061DKQ6_THECC Unreviewed; 220 AA.
AC A0A061DKQ6;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE RecName: Full=RNase H type-1 domain-containing protein {ECO:0000259|Pfam:PF13456};
GN ORFNames=TCM_002090 {ECO:0000313|EMBL:EOX93245.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOX93245.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOX93245.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
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DR EMBL; CM001879; EOX93245.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061DKQ6; -.
DR EnsemblPlants; EOX93245; EOX93245; TCM_002090.
DR Gramene; EOX93245; EOX93245; TCM_002090.
DR HOGENOM; CLU_000680_21_0_1; -.
DR InParanoid; A0A061DKQ6; -.
DR Proteomes; UP000026915; Chromosome 1.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd06222; RNase_H_like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR044730; RNase_H-like_dom_plant.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR33033:SF83; ACID BINDING PROTEIN, PUTATIVE-RELATED; 1.
DR PANTHER; PTHR33033; POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATED; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000026915}.
FT DOMAIN 88..211
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|Pfam:PF13456"
SQ SEQUENCE 220 AA; 25160 MW; ABEF99E281186288 CRC64;
MAWYAINWVI WTTRNDVIFN GKIWDMEQIF EPTKFRVVWL VNAKWPNHNC SIGDLARLLS
EGNILTRGRN TKEKMAWTRP VKGSLKFNTN GASKGYLGDS GIGGILPNEQ GDVLVLLCKF
VGICDSNKTE LLVVKKAALI HVASRWCTSR LLPIEYDKRN VIKYITSPTD VPWRLRQLVI
QTLNVLCKIS KWEIKHILCT TNEKADSLAK EGILRPENFF
//
