ID   A0A061DZ53_THECC        Unreviewed;       649 AA.
AC   A0A061DZ53;
DT   03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT   03-SEP-2014, sequence version 1.
DT   27-MAR-2024, entry version 35.
DE   SubName: Full=Pentatricopeptide repeat (PPR) superfamily protein isoform 2 {ECO:0000313|EMBL:EOX98059.1};
GN   ORFNames=TCM_006909 {ECO:0000313|EMBL:EOX98059.1};
OS   Theobroma cacao (Cacao) (Cocoa).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX   NCBI_TaxID=3641 {ECO:0000313|EMBL:EOX98059.1, ECO:0000313|Proteomes:UP000026915};
RN   [1] {ECO:0000313|EMBL:EOX98059.1, ECO:0000313|Proteomes:UP000026915}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX   PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA   Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA   Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA   Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA   Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA   Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA   Kuhn D.N.;
RT   "The genome sequence of the most widely cultivated cacao type and its use
RT   to identify candidate genes regulating pod color.";
RL   Genome Biol. 14:R53.1-R53.24(2013).
CC   -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC       {ECO:0000256|ARBA:ARBA00007626}.
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DR   EMBL; CM001880; EOX98059.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A061DZ53; -.
DR   EnsemblPlants; EOX98059; EOX98059; TCM_006909.
DR   Gramene; EOX98059; EOX98059; TCM_006909.
DR   HOGENOM; CLU_022912_0_0_1; -.
DR   Proteomes; UP000026915; Chromosome 2.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 7.
DR   PANTHER; PTHR47939:SF2; FERTILITY RESTORER; 1.
DR   PANTHER; PTHR47939; MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE; 1.
DR   Pfam; PF01535; PPR; 1.
DR   Pfam; PF13041; PPR_2; 3.
DR   Pfam; PF13812; PPR_3; 1.
DR   PROSITE; PS51375; PPR; 8.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          163..197
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          198..233
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          234..268
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          269..303
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          339..373
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          374..404
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          409..443
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          444..478
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REGION          26..65
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        33..65
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   649 AA;  73029 MW;  A8458BE84F10CCAF CRC64;
     MEISSLLGTG FHLQILTFPS PSSFPRIPSL SPPTPRASIS NLNSATSTTA TPVKEPNPTR
     PHSKSYLQRK SALLEVQQSS DLNSALQNFG GILKPQDLNV IIRHFGKLGK WHHLSELFAW
     MQQHGKTNGS SYSSYIKIMG KKLSPIKALE IYNSIPDEST RINVFICNSL LSSLVRNGKF
     ESGIKLFDKM KQDGLTPDSV TYNTLLAGCI KIKHGHSKAL ELIKELKYNG LKMDSVMYGT
     LLAVCASSGL HEEAQNYFNQ MREEGHSPNL YHYSSLLNAY SYDGNYCKAD ELVEQMKSSG
     LVPNKVILTT LLKVYVRGGL FEKSTKLLAE LEALGYAEDE MPFCLLMDGL SKAGRLDEAR
     SVFVEMQQKC VKSDGYSHSI MISALCRAGL FEEAKELAQD FEAQYNKYDL VMLNTMLCAY
     CRAGEMESVM QTMKKMDELA ISPDYNTFHI LIKYFCKEKL YLLAYKTMED MHGKGYHPEE
     ELCSSLIFQL GKMKAHLEAF SVYNMLRYSK RTMCKALHEK ILHILIAGQL LKDAYVVVKD
     NAELISQPAI TKFATAFMKL GNINMINDVL KVLHGSGYKI DQMAISRYLG QPEKKELLLQ
     LLQWMPGHGY VVDSSTRNMI LKNSQLLGRQ LTAEILSKQH MMSKVSRST
//