ID A0A061E3K9_THECC Unreviewed; 393 AA.
AC A0A061E3K9;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE RecName: Full=RNase H type-1 domain-containing protein {ECO:0000259|PROSITE:PS50879};
GN ORFNames=TCM_008248 {ECO:0000313|EMBL:EOX99545.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOX99545.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOX99545.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
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DR EMBL; CM001880; EOX99545.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061E3K9; -.
DR EnsemblPlants; EOX99545; EOX99545; TCM_008248.
DR Gramene; EOX99545; EOX99545; TCM_008248.
DR eggNOG; ENOG502T2C6; Eukaryota.
DR HOGENOM; CLU_689666_0_0_1; -.
DR InParanoid; A0A061E3K9; -.
DR Proteomes; UP000026915; Chromosome 2.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd06222; RNase_H_like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR044730; RNase_H-like_dom_plant.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR33033:SF83; ACID BINDING PROTEIN, PUTATIVE-RELATED; 1.
DR PANTHER; PTHR33033; POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATED; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50879; RNASE_H_1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000026915}.
FT DOMAIN 292..393
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|PROSITE:PS50879"
SQ SEQUENCE 393 AA; 44266 MW; 65E4CBF80AB3598D CRC64;
MKNKLDPCSM MPFEKSFKPS LLWKHITEPL QPSSKFHDLV ANSFNHSLGD GSKISLWKDA
WIEDFHIASF FPRIFALAVD KKATITDSGR WDDKKWIWDI KLRRQPLSWE TKQWTDLKPF
PKAPILIPLI RTSSFGSQPQ VEPSVHSFCR AFYDSQNGPD NLWKLLWIGL APPKAETFCW
QVLHGKLAAK AILMDRGIIS SDAAMCTFSN GISNGLLQAV PLHSSLHGCY TFALLKKETL
EKCSSLHLSG PFGCRWNLGH IPTDTCFFQP TTFSNSAVKA RQRTNVIWEP LPLGTLKLNI
DGAAKGKLGP AGIGGLLRDH HDFIRGTFSH HIGIEDSNFA ELQAIHQGLN FFFASPWASN
HQLEVESDST DVILWVKDNT KVPWKMKFTS NAI
//
