ID A0A061FHM7_THECC Unreviewed; 429 AA.
AC A0A061FHM7;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=RNase H family protein {ECO:0000313|EMBL:EOY13984.1};
GN ORFNames=TCM_032958 {ECO:0000313|EMBL:EOY13984.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY13984.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY13984.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM001885; EOY13984.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061FHM7; -.
DR EnsemblPlants; EOY13984; EOY13984; TCM_032958.
DR Gramene; EOY13984; EOY13984; TCM_032958.
DR eggNOG; KOG1075; Eukaryota.
DR HOGENOM; CLU_000680_5_2_1; -.
DR InParanoid; A0A061FHM7; -.
DR OMA; SANCCAK; -.
DR Proteomes; UP000026915; Chromosome 7.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd06222; RNase_H_like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR044730; RNase_H-like_dom_plant.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR026960; RVT-Znf.
DR PANTHER; PTHR47723; OS05G0353850 PROTEIN; 1.
DR PANTHER; PTHR47723:SF23; REVERSE TRANSCRIPTASE-LIKE PROTEIN; 1.
DR Pfam; PF13456; RVT_3; 1.
DR Pfam; PF13966; zf-RVT; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000026915}.
FT DOMAIN 97..180
FT /note="Reverse transcriptase zinc-binding"
FT /evidence="ECO:0000259|Pfam:PF13966"
FT DOMAIN 269..388
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|Pfam:PF13456"
SQ SEQUENCE 429 AA; 50485 MW; 525A04C66A24AF7D CRC64;
MLASCSVTEQ HIRGRIGRGE LFFWHDYWMG DEPLVNRFPS FASSMILVSN FYQNGSWHIG
KLNDALLEDV VTEIMKIPID ESRIYEAYWA PTSDGKFTTK SAWEIVRQRH SINFVFYSIW
HRSIPLSISF FLWRLFQDWI PVDLRLKSKG FQLVFKCQHC NSKESLFHVM WECPLASQVW
NYFAKFFQIY IIHRKSIYQI IWAWLFSSDY TKKGHIHILI PLFIFWFLWV ERNDAKHRNL
GMYPNRKPSL PKPKVFSWQK PLTGEFKLNV DGGSKYDCQS AAGGRLLRDH TGTLIFSFVE
NFGPYNSLQA ELMALYRGLL LCIEHNVRRL WIEMDAKVVI QMIHRGHKGS AQIRYLLASI
RKCLSVISFR ISHIHREGNQ AADLLSNQGY MHQNLHVFSQ VKGQLKGILG LDKNNLRSEF
LSFHELEYF
//
