ID   A0A061FV99_THECC        Unreviewed;       717 AA.
AC   A0A061FV99;
DT   03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT   03-SEP-2014, sequence version 1.
DT   27-MAR-2024, entry version 38.
DE   RecName: Full=Protein FAR1-RELATED SEQUENCE {ECO:0000256|RuleBase:RU367018};
GN   ORFNames=TCM_013043 {ECO:0000313|EMBL:EOY21475.1};
OS   Theobroma cacao (Cacao) (Cocoa).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX   NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY21475.1, ECO:0000313|Proteomes:UP000026915};
RN   [1] {ECO:0000313|EMBL:EOY21475.1, ECO:0000313|Proteomes:UP000026915}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX   PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA   Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA   Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA   Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA   Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA   Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA   Kuhn D.N.;
RT   "The genome sequence of the most widely cultivated cacao type and its use
RT   to identify candidate genes regulating pod color.";
RL   Genome Biol. 14:R53.1-R53.24(2013).
CC   -!- FUNCTION: Putative transcription activator involved in regulating light
CC       control of development. {ECO:0000256|RuleBase:RU367018}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU367018}.
CC   -!- SIMILARITY: Belongs to the FHY3/FAR1 family.
CC       {ECO:0000256|ARBA:ARBA00005889, ECO:0000256|RuleBase:RU367018}.
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DR   EMBL; CM001881; EOY21475.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A061FV99; -.
DR   EnsemblPlants; EOY21475; EOY21475; TCM_013043.
DR   Gramene; EOY21475; EOY21475; TCM_013043.
DR   Proteomes; UP000026915; Chromosome 3.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProtKB-UniRule.
DR   InterPro; IPR031052; FHY3/FAR1.
DR   InterPro; IPR018289; MULE_transposase_dom.
DR   InterPro; IPR006564; Znf_PMZ.
DR   InterPro; IPR007527; Znf_SWIM.
DR   PANTHER; PTHR31669:SF161; PROTEIN FAR-RED ELONGATED HYPOCOTYL 3; 1.
DR   PANTHER; PTHR31669; PROTEIN FAR1-RELATED SEQUENCE 10-RELATED; 1.
DR   Pfam; PF10551; MULE; 1.
DR   Pfam; PF04434; SWIM; 1.
DR   SMART; SM00575; ZnF_PMZ; 1.
DR   PROSITE; PS50966; ZF_SWIM; 1.
PE   3: Inferred from homology;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723,
KW   ECO:0000256|RuleBase:RU367018}; Nucleus {ECO:0000256|RuleBase:RU367018};
KW   Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius};
KW   Zinc {ECO:0000256|RuleBase:RU367018};
KW   Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00325,
KW   ECO:0000256|RuleBase:RU367018}.
FT   TRANSMEM        574..597
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          404..440
FT                   /note="SWIM-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50966"
SQ   SEQUENCE   717 AA;  82826 MW;  2479C814383324AD CRC64;
     MHVKRRPDGK WVVHSFVKEH NHELLPAQAV SEQTRRMYAA MARQFAEYKN VVGLKNDPKN
     PFDKGRNLAL EAGDVKILLE FFTHMQNINS NFFYAIDLGE DQRLKSLFWV DAKSRHDYSY
     FCDVVSFDTT YVRNKYKMPL ALFIGVNHHY QFMPLGCALV SDDSAATFSW LMQTWLKAMG
     GQSPRVIITD QDRIVKSVVA EIFPNTHHCF FLWHVLGKVS ENLGHVIKQH GNFMAKFEKC
     IYRSWTEEEF AKRWWKILDR FGLKDDEWMK SLYEDRRKWV PTYIMDVLLA GMSMVQRSES
     VNSFFDKYVH KKTTVQEFLK QYEAILQDRY EEEAKANSDS WSKLPTLKSP SPFEKSVAGL
     YTHTVFKKFQ VEVVGAIACH PKPENHDATS SFFRVQDLEK NQDFIVTLNE MKSEVSCICR
     LYEYKGYLCR HAMVVLQING HSAIPSQYIL KRWTKEAKSR HLMGDESEQV QSRVQRYNDL
     FQRAMKLIEE GSLSQESYYI AFRSLEEAFG NCLSANTSNK SLAEAVTSPT QGMICIEEDN
     QSRSTSKTNK KKNPTKKRKV NYYSYGHVDI FLQILYPVLT GSFVLFLFLF FVCVLYWQGN
     SEQEVMTVPA TDGLQQMDKL SSRSVGLDGY FGAQTSVQGM VQLNLMAPRD NYYGNQQTIQ
     GLGQLNTIAA SHDGYYGPQQ TMPGMGQMDF FRAPGFYIRD DTNVRAAQLH DDASRHA
//