ID   A0A061GWR9_THECC        Unreviewed;       874 AA.
AC   A0A061GWR9;
DT   03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT   03-SEP-2014, sequence version 1.
DT   27-MAR-2024, entry version 35.
DE   RecName: Full=Protein FAR1-RELATED SEQUENCE {ECO:0000256|RuleBase:RU367018};
GN   ORFNames=TCM_042009 {ECO:0000313|EMBL:EOY34280.1};
OS   Theobroma cacao (Cacao) (Cocoa).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX   NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY34280.1, ECO:0000313|Proteomes:UP000026915};
RN   [1] {ECO:0000313|EMBL:EOY34280.1, ECO:0000313|Proteomes:UP000026915}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX   PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA   Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA   Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA   Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA   Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA   Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA   Kuhn D.N.;
RT   "The genome sequence of the most widely cultivated cacao type and its use
RT   to identify candidate genes regulating pod color.";
RL   Genome Biol. 14:R53.1-R53.24(2013).
CC   -!- FUNCTION: Putative transcription activator involved in regulating light
CC       control of development. {ECO:0000256|RuleBase:RU367018}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU367018}.
CC   -!- SIMILARITY: Belongs to the FHY3/FAR1 family.
CC       {ECO:0000256|ARBA:ARBA00005889, ECO:0000256|RuleBase:RU367018}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CM001887; EOY34280.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A061GWR9; -.
DR   EnsemblPlants; EOY34280; EOY34280; TCM_042009.
DR   Gramene; EOY34280; EOY34280; TCM_042009.
DR   Proteomes; UP000026915; Chromosome 9.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProtKB-UniRule.
DR   InterPro; IPR004330; FAR1_DNA_bnd_dom.
DR   InterPro; IPR031052; FHY3/FAR1.
DR   InterPro; IPR018289; MULE_transposase_dom.
DR   InterPro; IPR006564; Znf_PMZ.
DR   InterPro; IPR007527; Znf_SWIM.
DR   PANTHER; PTHR31669; PROTEIN FAR1-RELATED SEQUENCE 10-RELATED; 1.
DR   PANTHER; PTHR31669:SF218; PROTEIN FAR1-RELATED SEQUENCE 3; 1.
DR   Pfam; PF03101; FAR1; 1.
DR   Pfam; PF10551; MULE; 1.
DR   Pfam; PF04434; SWIM; 1.
DR   SMART; SM00575; ZnF_PMZ; 1.
DR   PROSITE; PS50966; ZF_SWIM; 1.
PE   3: Inferred from homology;
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723,
KW   ECO:0000256|RuleBase:RU367018}; Nucleus {ECO:0000256|RuleBase:RU367018};
KW   Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW   Zinc {ECO:0000256|RuleBase:RU367018};
KW   Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00325,
KW   ECO:0000256|RuleBase:RU367018}.
FT   DOMAIN          553..589
FT                   /note="SWIM-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50966"
FT   REGION          1..40
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          678..701
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..22
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        685..699
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   874 AA;  98658 MW;  CC9EC3332DF1E69B CRC64;
     MDVHVIDAEE GLGHRGMSDD GDAEPNEGGE ANNAENSLAH DEDGISEPYV AMEFNAEDAA
     KTYYDEYARR MGFSSKAGQL TRSKIDGTIV SREFVCGREG LKRRSADSCD ALLRIELKGD
     KWVVTKFVKE HSHSMVSPSK VHYLRPRRHF AGAAKTMADS YQGVGIVPSG VMYVSMDGNR
     ASMDANNRGL RNTPPAEANR SVKNIGTPNY AVRPVNRKRT LGRDAQNLLD YFKKMQAENP
     GFFYAIQLDD DNRMANVFWA DARSRTAYMH FGDAVTLDTS YRVNQYRVPF APFTGVNHHG
     QTILFGCALL LDDSEASFVW LFKTFLTAMN DRQPVSLITD LDRAIQTAVS QVFPGVRHCI
     NKWHVLREGP EKLAHVCHVH PNFQVELYNC INLTETIEEF ELSWSSILEK YDLRGHDWLQ
     SLYNSRAQWV PVYFRDSFFA AISPNQGFDG SFFDGYVNQQ TTIPMFFRQY ERAIENWFEK
     EIEADFDTIC TTPVLRTPSP MEKQAANLFT RKIFTKFQEE LVETFVYTAN RIEGDAAIST
     FRVAKFEDDN KAYIVTLNYP EMRANCSCQM FEYSGILCRH VLTVFTVTNV LTLPSHYILK
     RWTRNAKSVV ATDERSSELL AQESLTVRYN SLCREAIKYA EEGAIATETY NVAMGTLKEG
     GKKISVVKKN VAKVAPPSSL ASGAAYDDRK SSTSAPDTAP LLWPRQDEIT RRFNLNDTGA
     PAQSVSDLNL PRMAPVSLHR DDGHPDNMPV LPCLKSMTWV MENKNSTPGN RVAVINLKLQ
     DYSKNPSAEM EVKFQLSRVT LEPMLRSMAY ISEQLSTPAN RVAVINLKLQ DTETTTGESE
     VKFQVSRDTL GAMLRSMAYI REQLSNVVSI LFLY
//