ID A0A066ZNL3_HYDMR Unreviewed; 1467 AA.
AC A0A066ZNL3;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE RecName: Full=Diguanylate cyclase {ECO:0008006|Google:ProtNLM};
GN ORFNames=EI16_01950 {ECO:0000313|EMBL:KDN95097.1};
OS Hydrogenovibrio marinus.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Thiotrichales;
OC Piscirickettsiaceae; Hydrogenovibrio.
OX NCBI_TaxID=28885 {ECO:0000313|EMBL:KDN95097.1, ECO:0000313|Proteomes:UP000027341};
RN [1] {ECO:0000313|EMBL:KDN95097.1, ECO:0000313|Proteomes:UP000027341}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MH-110 {ECO:0000313|EMBL:KDN95097.1,
RC ECO:0000313|Proteomes:UP000027341};
RA Cha H.J., Jo B.H., Hwang B.H.;
RT "Draft genome sequence of Hydrogenovibrio marinus MH-110, a model organism
RT for aerobic H2 metabolism.";
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KDN95097.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; JMIU01000001; KDN95097.1; -; Genomic_DNA.
DR RefSeq; WP_051622962.1; NZ_JMIU01000001.1.
DR STRING; 28885.EI16_01950; -.
DR Proteomes; UP000027341; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 4.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 4.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR InterPro; IPR013655; PAS_fold_3.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 3.
DR PANTHER; PTHR44757:SF2; BIOFILM ARCHITECTURE MAINTENANCE PROTEIN MBAA; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF13185; GAF_2; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF08447; PAS_3; 1.
DR Pfam; PF08448; PAS_4; 1.
DR Pfam; PF13426; PAS_9; 2.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00086; PAC; 4.
DR SMART; SM00091; PAS; 3.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 4.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50113; PAC; 4.
DR PROSITE; PS50112; PAS; 2.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000027341};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 311..334
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 355..372
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 427..479
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 480..550
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 554..606
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 866..917
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 914..958
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 987..1039
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 1071..1203
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 1212..1466
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
FT COILED 1049..1076
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1467 AA; 166453 MW; F9140E2D71D4D50C CRC64;
MTKRNNFLAG VKKRILRQNI WLVFFLLFLM VPALAITIIK NHGPKIEAQS FNNLSSVAEL
RAYQVQSWLE EQNKVANVVS SNKVLMDYVQ SLLKKPNDET LKHSILALFG ALKEFYGYES
IELISSSGQL MLKLGEGSSN HFNHAVIAEL FSKSVKNRRD VRSGILKDKD GTLDTGAVVP
LIYAIDGKPT ILAMVVLFSD LSDHVFSHIQ KWPTFSRTSE SLLIHNENGH VEYLSPMKFA
GEGSSSQNKF SVSDQNLVSA IALRAGISGK TKGIDYRGKA VMAAYYPIKG THWMVVSKVD
VKEAHASLDD LVFWISVVSF IAFLIIGAAF WVVLSKQRHL DNYRLLTQKT ENERVLQQFY
DLPFIGMAIL SAEDFRWSRF NQRFKLMLGY SEEELTARSF FDLLPYGEVA LFKQRFTELA
SHKLDGFTQE TRLVGANQEL VYVIVSVQCT RRTNGDVQHF LLTVQDMTEI KQLGDRYLER
QNHLNILINT IPDLIWLKDI NGVYLSCNSR FESLYGAKEN DIVGKTDYDF VDKELADFFR
EHDKKAMQAG RSTENEEWLT FAETGYRGLF STIKTPMLNS RGQVMGILGV GRDITKRKQD
ELRLERLARI HSALSQTNEA IIQCHTEQDL YDRVCEVIVN NGDMKMAWIG KLDMVSGLVK
PVAWSGMNSN YLQGLEISVK NEELKGPTAI AIMTNAPYWC EDFQKDPHTA HWHERAKKFG
WQSSASIPLT QRSQVVATLN IYSDVVNAFD DEMKDLLLEM GADISFALSS YVAEQEREVI
EHERQEALER LQKIAGRLPG VIYQFQLYKN GRSCFPFASE AMEHIFRVKP ESIFEDATAV
FDRVYPDDLE GLNLSIQESA ENLASWQYEF RLIFDDGEIK WLSGNAIPQK QSDDSILWHG
FITDITERRK TEEQIEMASK VFEQSREGIM ITDANLKLLM VNDAFSDITG YSREEVLGSA
PSVLSSGKHT KEFYSQMWKQ IEGEGHWQGE IWNKHKSGRF YPEWLSISQG KNKDGEVMQY
IGVFTDISKM KESEEHIHRL EHFDSLTNLV NRESLIKRLT KAISQAEENH KNVAVLFIDL
DHFKNINDTL GHYVGDKMLM EVGRRISDLL GAEDQLGRQG GDEFIAVMPN ADESEAAHMA
ENVLKSVAFE MSLENLNLQI TPSVGIAIYP QDGSDAGSLL KNADTAMYQA KSDGRNNYRF
FTHEMQQHAA KIMSIESALR TALVRNEFEM YYQPQVCAHT HKVVGAEALI RWDNPELGRI
SPTEFIPVAE QSGQILDISN WVMETAIEQI KEWQERGLPF VNIAVNLSAA QFRDEALPSQ
IIGLLNKYKV DPSCLTVELT ETLAMSNPHS AVQIMDKLTS HGVRIAIDDF GTGYSSLSYL
KKFKATKLKL DQSFVRDVVE DADDRSIIIG MISLAQSLGL KTIAEGVETQ YQLSFLEEKG
CDEIQGYYFS KPIPSDEFAQ FISERKS
//
