ID A0A067QIX7_ZOONE Unreviewed; 972 AA.
AC A0A067QIX7;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 46.
DE RecName: Full=116 kDa U5 small nuclear ribonucleoprotein component {ECO:0000256|ARBA:ARBA00018774};
DE AltName: Full=U5 snRNP-specific protein, 116 kDa {ECO:0000256|ARBA:ARBA00031432};
GN ORFNames=L798_01330 {ECO:0000313|EMBL:KDR08844.1};
OS Zootermopsis nevadensis (Dampwood termite).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Polyneoptera; Dictyoptera; Blattodea; Blattoidea; Termitoidae;
OC Termopsidae; Zootermopsis.
OX NCBI_TaxID=136037 {ECO:0000313|EMBL:KDR08844.1, ECO:0000313|Proteomes:UP000027135};
RN [1] {ECO:0000313|EMBL:KDR08844.1, ECO:0000313|Proteomes:UP000027135}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Whole organism {ECO:0000313|EMBL:KDR08844.1};
RX PubMed=24845553; DOI=10.1038/ncomms4636;
RA Terrapon N., Li C., Robertson H.M., Ji L., Meng X., Booth W., Chen Z.,
RA Childers C.P., Glastad K.M., Gokhale K., Gowin J., Gronenberg W.,
RA Hermansen R.A., Hu H., Hunt B.G., Huylmans A.K., Khalil S.M.,
RA Mitchell R.D., Munoz-Torres M.C., Mustard J.A., Pan H., Reese J.T.,
RA Scharf M.E., Sun F., Vogel H., Xiao J., Yang W., Yang Z., Yang Z., Zhou J.,
RA Zhu J., Brent C.S., Elsik C.G., Goodisman M.A., Liberles D.A., Roe R.M.,
RA Vargo E.L., Vilcinskas A., Wang J., Bornberg-Bauer E., Korb J., Zhang G.,
RA Liebig J.;
RT "Molecular traces of alternative social organization in a termite genome.";
RL Nat. Commun. 5:3636-3636(2014).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; KK853292; KDR08844.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A067QIX7; -.
DR STRING; 136037.A0A067QIX7; -.
DR EnsemblMetazoa; KDR08844; KDR08844; L798_01330.
DR eggNOG; KOG0468; Eukaryota.
DR InParanoid; A0A067QIX7; -.
DR OMA; YIFRPIR; -.
DR OrthoDB; 166721at2759; -.
DR Proteomes; UP000027135; Unassembled WGS sequence.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:InterPro.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR CDD; cd04098; eEF2_C_snRNP; 1.
DR CDD; cd04090; EF2_II_snRNP; 1.
DR CDD; cd01683; EF2_IV_snRNP; 1.
DR CDD; cd16264; snRNP_III; 1.
DR CDD; cd04167; Snu114p; 1.
DR Gene3D; 3.30.230.10; -; 1.
DR Gene3D; 3.30.70.240; -; 1.
DR Gene3D; 3.30.70.870; Elongation Factor G (Translational Gtpase), domain 3; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 2.40.30.10; Translation factors; 1.
DR Gene3D; 3.90.1430.10; Yeast translation eEF2 (G' domain); 1.
DR InterPro; IPR041095; EFG_II.
DR InterPro; IPR035647; EFG_III/V.
DR InterPro; IPR000640; EFG_V-like.
DR InterPro; IPR004161; EFTu-like_2.
DR InterPro; IPR031950; EFTUD2_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR020568; Ribosomal_Su5_D2-typ_SF.
DR InterPro; IPR014721; Ribsml_uS5_D2-typ_fold_subgr.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR044121; Snu114_GTP-bd.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR InterPro; IPR005517; Transl_elong_EFG/EF2_IV.
DR InterPro; IPR035655; U5-116kDa_C.
DR NCBIfam; TIGR00231; small_GTP; 1.
DR PANTHER; PTHR42908:SF6; 116 KDA U5 SMALL NUCLEAR RIBONUCLEOPROTEIN COMPONENT; 1.
DR PANTHER; PTHR42908; TRANSLATION ELONGATION FACTOR-RELATED; 1.
DR Pfam; PF00679; EFG_C; 1.
DR Pfam; PF14492; EFG_III; 1.
DR Pfam; PF03764; EFG_IV; 1.
DR Pfam; PF16004; EFTUD2; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF03144; GTP_EFTU_D2; 1.
DR PRINTS; PR00315; ELONGATNFCT.
DR SMART; SM00838; EFG_C; 1.
DR SMART; SM00889; EFG_IV; 1.
DR SUPFAM; SSF54980; EF-G C-terminal domain-like; 2.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF54211; Ribosomal protein S5 domain 2-like; 1.
DR SUPFAM; SSF50447; Translation proteins; 1.
DR PROSITE; PS51722; G_TR_2; 1.
PE 4: Predicted;
KW GTP-binding {ECO:0000256|ARBA:ARBA00023134};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000027135};
KW Ribonucleoprotein {ECO:0000313|EMBL:KDR08844.1};
KW Spliceosome {ECO:0000256|ARBA:ARBA00022728}.
FT DOMAIN 126..409
FT /note="Tr-type G"
FT /evidence="ECO:0000259|PROSITE:PS51722"
FT REGION 1..51
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 14..47
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 972 AA; 109934 MW; E7494A542C4E4625 CRC64;
MDADLYDEFG NYIGPELESD EEEEEGYGDR EPEAQEYDDE GAEDQGEEMD TTPMAVVLHE
DKRYYPAALE VFGPEVETIV QEEDNQPLDK PLVAPIKKKK FQLKEQDLPE TVYNMEFLAD
MMDNPNLIRN VALIGHLHHG KTTFVDCLIR QTHPGFRSTE ERNLRYTDTL FTEQERGVGI
KAIPVTLVLP DVKNKSYLIN VFDTPGHVNF SDEVTAAKRI CDGVVLFVDA AEGVMLNTER
LLKHAVQEKL AITVCINKID RLMLELKLPP QDAYYKLRHI VEEINGLLSL YSDEENPKIV
SPILGNVCFA SSQYAVCFTL KSFANIYAQT YDGININEFS RRLWGDIYFN SKTRKFTKKS
PHGSAQRSFV EFILEPLYKI FAQVVGDVDT TLPAVLDELG IKLTKEEMKI NIRPLLRLIC
NKFLGDFSGF VDMCVQHIPS PVDNARLKVQ HIYTGPLDTD LAEHMCSCNP DGHLMVYSTK
MYPTEDCTFF QVLARVMSGT LHAGQEVRVL GENYTLADEE DSRILTVGRL WIYEARYKVE
VSRVPSGNWV LIEGIDQPIV KTSTITDLNI SDELYIFQPL KFNTQSVIKI AVEPVNPSEL
PKMLDGLRKV NKSYPLLATR VEESGEHVVL GTGELYLDCV MHDLRKMYSE IDIKVADPVV
AFCETVVETS SLKCFAETPN KKNKITMIAE PLEKGLAEDI ENEVVQISWN KKRLGEFFQT
KYDWDLLAAR SIWAFGPDST GPNILVDDTL PSEVDKGLLS SVKDSIVQGF QWGTREGPLC
EEPIRNVKFK ILDAVIAMEP LHRGGGQIIP TARRVAYSAF LMATPRLMEP YLFVEVQAPA
DCVSAVYTVL AKRRGHVTQD APVPGSPLYT IKAFIPAIDS FGFETDLRTH TQGQAFCLSV
FHHWQIVPGD PLDKSIVIRP LEPQPATHLA REFMIKTRRR KGLSEDVSIN KFFDDPMLLE
LARQDVMLNY PL
//
