ID A0A068RZ72_9FUNG Unreviewed; 1255 AA.
AC A0A068RZ72;
DT 01-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2014, sequence version 1.
DT 03-MAY-2023, entry version 37.
DE RecName: Full=Clustered mitochondria protein homolog {ECO:0000256|HAMAP-Rule:MF_03013};
DE AltName: Full=Protein TIF31 homolog {ECO:0000256|HAMAP-Rule:MF_03013};
GN Name=CLU1 {ECO:0000256|HAMAP-Rule:MF_03013};
GN Synonyms=TIF31 {ECO:0000256|HAMAP-Rule:MF_03013};
GN ORFNames=LCOR_06580.1 {ECO:0000313|EMBL:CDH55438.1};
OS Lichtheimia corymbifera JMRC:FSU:9682.
OC Eukaryota; Fungi; Fungi incertae sedis; Mucoromycota; Mucoromycotina;
OC Mucoromycetes; Mucorales; Lichtheimiaceae; Lichtheimia.
OX NCBI_TaxID=1263082 {ECO:0000313|EMBL:CDH55438.1, ECO:0000313|Proteomes:UP000027586};
RN [1] {ECO:0000313|EMBL:CDH55438.1, ECO:0000313|Proteomes:UP000027586}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JMRC:FSU:9682 {ECO:0000313|Proteomes:UP000027586};
RA Schwartze V.U., Winter S., Shelest E., Marcet-Houben M., Horn F.,
RA Wehner S., Hoffmann K., Riege K., Sammeth M., Nowrousian M., Valiante V.,
RA Linde J., Jacobsen I.D., Marz M., Brakhage A.A., Gabaldon T., Bocker S.,
RA Voigt K.;
RT "Gene expansion shapes genome architecture in the human pathogen
RT Lichtheimia corymbifera: an evolutionary genomics analysis in the ancient
RT terrestrial Mucorales (Mucoromycotina).";
RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: mRNA-binding protein involved in proper cytoplasmic
CC distribution of mitochondria. {ECO:0000256|HAMAP-Rule:MF_03013}.
CC -!- SUBUNIT: May associate with the eukaryotic translation initiation
CC factor 3 (eIF-3) complex. {ECO:0000256|HAMAP-Rule:MF_03013}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_03013}.
CC -!- SIMILARITY: Belongs to the CLU family. {ECO:0000256|HAMAP-
CC Rule:MF_03013}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDH55438.1}.
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DR EMBL; CBTN010000029; CDH55438.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A068RZ72; -.
DR STRING; 1263082.A0A068RZ72; -.
DR VEuPathDB; FungiDB:LCOR_06580.1; -.
DR OrthoDB; 927222at2759; -.
DR Proteomes; UP000027586; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0007005; P:mitochondrion organization; IEA:UniProtKB-UniRule.
DR CDD; cd15466; CLU-central; 1.
DR Gene3D; 3.30.2280.10; Hypothetical protein (hspc210); 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR HAMAP; MF_03013; CLU; 1.
DR InterPro; IPR033646; CLU-central.
DR InterPro; IPR025697; CLU_dom.
DR InterPro; IPR028275; CLU_N.
DR InterPro; IPR027523; CLU_prot.
DR InterPro; IPR007967; GSKIP_dom.
DR InterPro; IPR023231; GSKIP_dom_sf.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR000626; Ubiquitin-like_dom.
DR InterPro; IPR029071; Ubiquitin-like_domsf.
DR PANTHER; PTHR12601:SF6; CLUSTERED MITOCHONDRIA PROTEIN HOMOLOG; 1.
DR PANTHER; PTHR12601; EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3; 1.
DR Pfam; PF13236; CLU; 1.
DR Pfam; PF15044; CLU_N; 1.
DR Pfam; PF12807; eIF3_p135; 1.
DR Pfam; PF05303; GSKIP_dom; 1.
DR Pfam; PF13424; TPR_12; 2.
DR SUPFAM; SSF103107; Hypothetical protein c14orf129, hspc210; 1.
DR SUPFAM; SSF48452; TPR-like; 2.
DR SUPFAM; SSF54236; Ubiquitin-like; 1.
DR PROSITE; PS51823; CLU; 1.
DR PROSITE; PS50053; UBIQUITIN_2; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490, ECO:0000256|HAMAP-Rule:MF_03013};
KW Initiation factor {ECO:0000313|EMBL:CDH55438.1};
KW Protein biosynthesis {ECO:0000313|EMBL:CDH55438.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000027586};
KW RNA-binding {ECO:0000256|HAMAP-Rule:MF_03013}.
FT DOMAIN 37..97
FT /note="Ubiquitin-like"
FT /evidence="ECO:0000259|PROSITE:PS50053"
FT DOMAIN 326..574
FT /note="Clu"
FT /evidence="ECO:0000259|PROSITE:PS51823"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 616..663
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 908..932
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1198..1255
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1198..1214
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1255 AA; 140967 MW; 7A5A80861494058C CRC64;
MADSVEQKIP PANATDTLED PAAAQAAAEE VVAEETFQLT IKLPDGQGEG VKIIASPRET
IHDIKQSIME SPETCAHSCF HLAFNGQVLN DFLELGEVQG MTTESDLVLV EAPYNERDVR
IHINRLRDLL GGPYKQNPSA AGIDGGISFL TAVTGEIDEE IVPENEKKVE DLFSDEPIPE
HAFTGADINA RSKLSDFVPS AFQRLAPQCL KSIALSGWNP VPHARRLQGD LLYLAVTTLE
NDNLHITAST KGFFVNNSNT STFDPSRKQS NKKVFAHSLI TLLQNISGQF ASNFIKLQDF
ITRHHMLEVL PSNTYFPAHP WVVQAPEHTY DPARPAEPLL NFGSDAVESL RDWNDELQSH
RELPKSNLQE RVLRERLINK VQAEFTDAAV RGAMAVVNGI VVPLNPLEPE ESHMYVYNNI
FFSKGNDGRG SFDLLGGDEA AHVATGKDLE GVRIFNSIDS TNLYTLGTVI VDYKGVRVIA
QSIVPGIFRR SEENTIVYGS VDNGVEILAD KTFHDAIGRD IVKSLHLAEH GVVDEKGNEV
KLHTSMETKG LLGADGRRYM LDLYRTNPVD IEFQEKECNE DKPDMPAYPH KMTLLRPELI
SLYWEHKFRE WVKAKTEEVK KEREQNKPAV EEKKDEEKKD EKKDAEDEKK EDAEGDKKDA
EEEEDIKIDV TEFKLSFNPD VFTAAKLAGG ADSAIVKEEE QTVRDASKFL NDEVIPSLVL
DFASYAVSPL DGEALTKAMH RRGINMRYLG KIAQLVSISE DKRIEHIQEL AIQEMITRVC
KRLLRKYLHN CKVDEIRACV AHFFNCLLGN QLNPKPKPDI PDSASRNDIE WAKLTPSMLE
SIVKRQVLLR FRYKLDDDFL SKIKPVPTLR EICLRVGVQL EARDYRFHAY DHNEHEAMVA
EQARIRKAQQ AQQQPGAKAK KSKKAAAKEE ANKPKYRVNT FLPEDVQNLM PTVKQASSRS
LFAEETFEAG KMSLAQGHRQ LGLELLLESL TLHEQTYGFL HPETSKCYAT LAMIYHHSED
REAALDLQRK AVIAAERTNG VDHPETVHHY LNLGLFEHAA GRTKLALRYI RHALYYWDLL
FGPGHPDSAT ADNNAGVMLQ SLRDYPLSTQ FFERACNTQE TILGKEHVLT ATGYHVLAKA
YTLQGQFGKA LEAERLAFGV FEKKLGAEDP RTKESDMWLK ELTSNAVLTA QRMRQQAQIA
ESQARVSGPT ANAAPSQMHR GEMPIDQVLQ YINGEAPKSN GARKGKKKSA QKKRR
//