ID   A0A069DBC8_9BACE        Unreviewed;       708 AA.
AC   A0A069DBC8;
DT   01-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   01-OCT-2014, sequence version 1.
DT   24-JAN-2024, entry version 30.
DE   SubName: Full=Transcription accessory protein {ECO:0000313|EMBL:GAK37559.1};
GN   ORFNames=JCM15093_2816 {ECO:0000313|EMBL:GAK37559.1};
OS   Bacteroides graminisolvens DSM 19988 = JCM 15093.
OC   Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC   Bacteroides.
OX   NCBI_TaxID=1121097 {ECO:0000313|EMBL:GAK37559.1, ECO:0000313|Proteomes:UP000027601};
RN   [1] {ECO:0000313|EMBL:GAK37559.1, ECO:0000313|Proteomes:UP000027601}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JCM 15093 {ECO:0000313|EMBL:GAK37559.1,
RC   ECO:0000313|Proteomes:UP000027601};
RX   PubMed=25736980;
RA   Inoue J., Oshima K., Suda W., Sakamoto M., Iino T., Noda S., Hongoh Y.,
RA   Hattori M., Ohkuma M.;
RT   "Distribution and evolution of nitrogen fixation genes in the phylum
RT   bacteroidetes.";
RL   Microbes Environ. 30:44-50(2015).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:GAK37559.1}.
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DR   EMBL; BAJS01000023; GAK37559.1; -; Genomic_DNA.
DR   RefSeq; WP_024997203.1; NZ_KE386627.1.
DR   AlphaFoldDB; A0A069DBC8; -.
DR   STRING; 1121097.GCA_000428125_01458; -.
DR   eggNOG; COG2183; Bacteria.
DR   OrthoDB; 9804714at2; -.
DR   Proteomes; UP000027601; Unassembled WGS sequence.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR   CDD; cd05685; S1_Tex; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR   Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR   Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR   Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR   InterPro; IPR041692; HHH_9.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR010994; RuvA_2-like.
DR   InterPro; IPR003029; S1_domain.
DR   InterPro; IPR044146; S1_Tex.
DR   InterPro; IPR023323; Tex-like_dom_sf.
DR   InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR   InterPro; IPR018974; Tex-like_N.
DR   InterPro; IPR032639; Tex_YqgF.
DR   InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR   InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR   PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR   PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR   Pfam; PF12836; HHH_3; 1.
DR   Pfam; PF17674; HHH_9; 1.
DR   Pfam; PF00575; S1; 1.
DR   Pfam; PF09371; Tex_N; 1.
DR   Pfam; PF16921; Tex_YqgF; 1.
DR   SMART; SM00316; S1; 1.
DR   SMART; SM00732; YqgFc; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR   SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR   PROSITE; PS50126; S1; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000027601}.
FT   DOMAIN          636..705
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
SQ   SEQUENCE   708 AA;  79561 MW;  357C0BB9EC95092C CRC64;
     MKNYQLLIST ALNITERQVE STLNLLNEGA TIPFISRYRK EMTGGLDEVQ IGNIKERYDK
     LCEITKRKET IINTIEEQNK LTPELKKRIE ETWESSTLED IYLPYKPKRK TKAEIARQKG
     LEPLAITLMM QRENNPEEKA AQFLKNGLKD INEAIKGAQD IVAEMVNEDE QARNTVRNLF
     GRQAVISSKV IKGKEEEAIK YRDYFDFSEP LKRCSSHRLL AIRRGESEGL LKVSISPDDE
     ECVGRLERMF IRSNNACARY VAEALQDAYK RLLKPSIETE TGNLSKEKAD DEAIRVFTEN
     LKQLLLAAPL GQKRVLGIDP GFRTGCKVVC LDAQGNLLHN ENIYPHPPVN KTGEAASKIR
     KMVEAYNIEA IAIGNGTASR ETEEFITNQQ FDRKLQVFVV SEQGASIYSA SKVARDEFPD
     YDVTVRGAVS IGRRLMDPLA ELVKIDAKSI GVGQYQHDVD QTKLKKALDQ TVENCVNLVG
     VNLNTASSHL LTYISGLGPQ LALNITNYRA ENGAFASRKE LMKVPRMGAK AFEQCAGFLR
     IPNAKNPLDN TAVHPESYHI VEKMAKDLGC TVAELIANKE LRGRIDLKQY ITSTVGLPTL
     NDIMQELDKP GRDPRETAKV FEFDRSIRTL DDLREGMILP GIVGNITNFG AFVDLGIKEN
     GLIHLSQMAD RYISDPSEVV SIHQHITVKV LSIDKERKRI QLTLKGIE
//