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Database: UniProt
Entry: A0A072TQQ4_MEDTR
LinkDB: A0A072TQQ4_MEDTR
Original site: A0A072TQQ4_MEDTR 
ID   A0A072TQQ4_MEDTR        Unreviewed;      1467 AA.
AC   A0A072TQQ4;
DT   01-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   01-OCT-2014, sequence version 1.
DT   24-JAN-2024, entry version 49.
DE   SubName: Full=Disease resistance protein (TIR-NBS-LRR class) {ECO:0000313|EMBL:KEH19188.1};
DE   SubName: Full=Putative TIR domain, winged helix-turn-helix DNA-binding domain-containing protein {ECO:0000313|EMBL:RHN40436.1};
GN   Name=25501109 {ECO:0000313|EnsemblPlants:KEH19188};
GN   OrderedLocusNames=MTR_8g042470 {ECO:0000313|EMBL:KEH19188.1};
GN   ORFNames=MtrunA17_Chr8g0354701 {ECO:0000313|EMBL:RHN40436.1};
OS   Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC   NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX   NCBI_TaxID=3880 {ECO:0000313|EMBL:KEH19188.1, ECO:0000313|Proteomes:UP000002051};
RN   [1] {ECO:0000313|EMBL:KEH19188.1, ECO:0000313|Proteomes:UP000002051}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=A17 {ECO:0000313|EMBL:KEH19188.1}, and cv. Jemalong A17
RC   {ECO:0000313|EnsemblPlants:KEH19188,
RC   ECO:0000313|Proteomes:UP000002051};
RX   PubMed=22089132; DOI=10.1038/nature10625;
RA   Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA   Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA   Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA   Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA   Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA   Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA   Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA   Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA   Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA   Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA   Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA   Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA   Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA   Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA   Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA   Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA   Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA   Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA   Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA   Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA   Town C.D., Roe B.A.;
RT   "The Medicago genome provides insight into the evolution of rhizobial
RT   symbioses.";
RL   Nature 480:520-524(2011).
RN   [2] {ECO:0000313|EMBL:KEH19188.1, ECO:0000313|Proteomes:UP000002051}
RP   GENOME REANNOTATION.
RC   STRAIN=A17 {ECO:0000313|EMBL:KEH19188.1}, and cv. Jemalong A17
RC   {ECO:0000313|EnsemblPlants:KEH19188,
RC   ECO:0000313|Proteomes:UP000002051};
RX   PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA   Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA   Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA   Schwartz D.C., Town C.D.;
RT   "An improved genome release (version Mt4.0) for the model legume Medicago
RT   truncatula.";
RL   BMC Genomics 15:312-312(2014).
RN   [3] {ECO:0000313|EnsemblPlants:KEH19188}
RP   IDENTIFICATION.
RC   STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:KEH19188};
RG   EnsemblPlants;
RL   Submitted (APR-2015) to UniProtKB.
RN   [4] {ECO:0000313|EMBL:RHN40436.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Leaves {ECO:0000313|EMBL:RHN40436.1};
RA   Pecrix Y., Gamas P., Carrere S.;
RT   "Whole-genome landscape of Medicago truncatula symbiotic genes.";
RL   Nat. Plants 0:0-0(2018).
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DR   EMBL; CM001224; KEH19188.1; -; Genomic_DNA.
DR   EMBL; PSQE01000008; RHN40436.1; -; Genomic_DNA.
DR   RefSeq; XP_013445162.1; XM_013589708.1.
DR   EnsemblPlants; KEH19188; KEH19188; MTR_8g042470.
DR   GeneID; 25501109; -.
DR   Gramene; KEH19188; KEH19188; MTR_8g042470.
DR   KEGG; mtr:25501109; -.
DR   OrthoDB; 908874at2759; -.
DR   Proteomes; UP000002051; Chromosome 8.
DR   Proteomes; UP000265566; Chromosome 8.
DR   GO; GO:0043531; F:ADP binding; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0008757; F:S-adenosylmethionine-dependent methyltransferase activity; IEA:UniProt.
DR   GO; GO:0006952; P:defense response; IEA:InterPro.
DR   GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR   Gene3D; 1.10.8.430; Helical domain of apoptotic protease-activating factors; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 2.
DR   Gene3D; 3.40.50.10140; Toll/interleukin-1 receptor homology (TIR) domain; 1.
DR   InterPro; IPR042197; Apaf_helical.
DR   InterPro; IPR044974; Disease_R_plants.
DR   InterPro; IPR001611; Leu-rich_rpt.
DR   InterPro; IPR032675; LRR_dom_sf.
DR   InterPro; IPR002182; NB-ARC.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR000157; TIR_dom.
DR   InterPro; IPR035897; Toll_tir_struct_dom_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   PANTHER; PTHR11017:SF219; ARCHAEAL ATPASE; 1.
DR   PANTHER; PTHR11017; LEUCINE-RICH REPEAT-CONTAINING PROTEIN; 1.
DR   Pfam; PF00560; LRR_1; 1.
DR   Pfam; PF00931; NB-ARC; 1.
DR   Pfam; PF01582; TIR; 1.
DR   PRINTS; PR00364; DISEASERSIST.
DR   SMART; SM00255; TIR; 1.
DR   SUPFAM; SSF52058; L domain-like; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   SUPFAM; SSF52200; Toll/Interleukin receptor TIR domain; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR   PROSITE; PS50104; TIR; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   DNA-binding {ECO:0000313|EMBL:RHN40436.1};
KW   Plant defense {ECO:0000256|ARBA:ARBA00022821};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002051}.
FT   DOMAIN          7..177
FT                   /note="TIR"
FT                   /evidence="ECO:0000259|PROSITE:PS50104"
FT   COILED          1314..1397
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   1467 AA;  165477 MW;  43E6C21A3E28F56B CRC64;
     MDVQAFFTYD VFLSFRGSDT RYGVTGYLYK ALTDKGIRTF IHDSELQIGD EITPSLFKAI
     EESRICIIIF STNYASSSFC LDELTAILYS YEEERNGRVV FPVFYHVESS VIRHGRGSYG
     DALAKHEERF MKDGVHRVKK WRTSLCKAAN LSGYHFTGDG YEHEFIEAIV EYVCKQVTHV
     VPLHTADADQ AVGIEPRVNN VNSLLDLGSD NVLLLGIYGM GGIGKTTIAR AVYDSISDQF
     EGLCFLNNVR DDSDKFGPMH LQETMLYETC GLKIKLGGVN EGIRIIKQRL SKKKVLLVLD
     DVNKLMQLEV IAGAYDWFGP GSRIIITTRE HHLLVMHGVD IIYEVDELSE GESLDLLCRS
     AFKTNKVDPS YADILKRVFT FTSGLPLALR AVGSYLFGRN INEWESALDL YERIPHNDIQ
     TILRISFDSL EEEEKDIFLD IACFFNGDKL EYVEDILLAR YGVSVRYSIR VLIEKSLIYI
     DKGLVTLHNL VEDMGKEIVR QESPKEPGER SRLWFVNDVV QVLEDNSGSA AIEILFLDFP
     IHAMNSNGSK GGEVNWDGEA LKNMRNLKTL VIRNGSFNQG PTHLPNSLRV LEWWGYPSPS
     LPNDFHPKKL AMLKLPESCL RISEPIQGVI NLTVLDFSYS DWITHIPDVS GLQNLEKIYF
     KQCENLTRIH ESVGLLEKLR ILNVVHCKKL SALPPIRLTS LEHLNLSHCS VLESFPEILG
     KMENLTELHI MGSPIKELPY SIQNLIRLRK LELHICGMVR LPSSIVMLPE LSLMCVSKCQ
     RLWFSEQDKG EELESKSSKT EHLTLSYCNI SDELLPIGLA WFANVKDLNL SGNNFETLHA
     CIKECPFLRN LKMDYCDNIQ EIKGLPWKLE SFSAKGCTSL KYMDLAGESH SLRELILDDC
     VFLREIIGDL PNLNHFSAKN CVSLTSQCTS MLMNQESVEA GNKMFSLPGK KIPDWFALQS
     REESTAFYFR NKFPAVSVCL VIGHLDEKPI AVNFSPKVFI NGNKLSSGNQ FVYNFRVATD
     HILLFDLRLL KFEDNGDALF LDNEWNHVVV SYVDHITDNE VPIRVVSKYS GIHVFNQISG
     MEDIRFTIPQ KTLINATLDS TNSMMVPSQK IMTKRPEEDQ TVVLSPTLKS IQSPSPTSEV
     VKGLVPLPTF PVKRPLPDVG EEISENLSDE EVCVTAIQKD LPVIQRCSEG DDVELESISC
     EEKYSSNTEG SDSDDPFDLV NRKLYDSGMA TISSGERSGD ASMRSIREAI NGLELLMVND
     LSEVSSDPAK LSELHQLLDL LSTSSHPKVT VEVKEAIVEF KKNVFLSFQE FQSAAESVNK
     LKNFERQLAV IQQKTMEGKG QRTDLKNTIK KVSLAMTAEI SRKKELEAEN ATLRIQLDTN
     ERELEQVVLN LKNQEEILST YSTSCASLNE QARALLKQTD DLLAASSGIK QDGEAAELKQ
     SRIKLTWSID LTSQLNKMKK TILGFFE
//
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