ID A0A072V6R6_MEDTR Unreviewed; 1560 AA.
AC A0A072V6R6;
DT 01-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2014, sequence version 1.
DT 08-NOV-2023, entry version 25.
DE SubName: Full=CW-type zinc-finger protein {ECO:0000313|EMBL:KEH37306.1};
GN Name=25488173 {ECO:0000313|EnsemblPlants:KEH37306};
GN OrderedLocusNames=MTR_2g437350 {ECO:0000313|EMBL:KEH37306.1};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX NCBI_TaxID=3880 {ECO:0000313|EMBL:KEH37306.1, ECO:0000313|Proteomes:UP000002051};
RN [1] {ECO:0000313|EMBL:KEH37306.1, ECO:0000313|Proteomes:UP000002051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A17 {ECO:0000313|EMBL:KEH37306.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:KEH37306,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [2] {ECO:0000313|EMBL:KEH37306.1, ECO:0000313|Proteomes:UP000002051}
RP GENOME REANNOTATION.
RC STRAIN=A17 {ECO:0000313|EMBL:KEH37306.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:KEH37306,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume Medicago
RT truncatula.";
RL BMC Genomics 15:312-312(2014).
RN [3] {ECO:0000313|EnsemblPlants:KEH37306}
RP IDENTIFICATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:KEH37306};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
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DR EMBL; CM001218; KEH37306.1; -; Genomic_DNA.
DR RefSeq; XP_013463295.1; XM_013607841.1.
DR EnsemblPlants; KEH37306; KEH37306; MTR_2g437350.
DR Gramene; KEH37306; KEH37306; MTR_2g437350.
DR Proteomes; UP000002051; Chromosome 2.
DR ExpressionAtlas; A0A072V6R6; differential.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 3.30.40.100; -; 1.
DR InterPro; IPR011124; Znf_CW.
DR PANTHER; PTHR46524:SF12; CW-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR46524; CW-TYPE ZINC FINGER; 1.
DR Pfam; PF07496; zf-CW; 1.
DR SUPFAM; SSF101447; Formin homology 2 domain (FH2 domain); 1.
DR PROSITE; PS51050; ZF_CW; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000002051};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000313|EMBL:KEH37306.1}.
FT DOMAIN 524..577
FT /note="CW-type"
FT /evidence="ECO:0000259|PROSITE:PS51050"
FT REGION 1..42
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 84..129
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 303..350
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 373..425
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 637..743
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 755..786
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 801..918
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 935..972
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1120..1142
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1188..1236
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 7..22
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 102..127
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 303..318
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 325..343
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 373..398
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 405..425
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 646..678
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 679..716
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 811..833
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 834..850
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 851..879
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 892..912
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 954..970
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1122..1141
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1188..1216
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1217..1236
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1560 AA; 170744 MW; DDD24615FD3FD8E3 CRC64;
MPPSARIGNA SLSSNSFRDV RSASVDVSAK KDSGVSSNDV VGRCTLKDDT AIKKGNSTDQ
RTLKFRLKMN SNFLAQKTAE IYSGLGLDDS PSSSMEHSPV ESEGTPPPPP PPPPPPPLPP
PPPPVSKANA EDSEIGIIQV MTSFPFPGGI ITSPLHESLL SSMKNEKIIG DRRYMSSRNC
HQEPRSMSTD ESDSFVADGH LKKRIVRIVR QKEKKLEEKQ VNGTLPEKDI ALHTKKRLGS
RTPDCKEFLS NELKSTPMSS SICDVGETAE VTAKASNVSK KFSDNGVQGR MVSVEALKEE
SLESISGHDF KKTEKQNAGN GLRKNVLEDK LESSKKDSST DPNNDDKCNN AYMISKNVER
DAVKCKIDKM YETPQRVKVV SDGKNKSKGD RSPGKPEVVA REDSVGGTNN PTVTDKGSAG
FNTDSKSKMI KTKSVKDNKV RHGSKGSLKA KHLDQKIEAF PGNSAVKSSK SNEKQIPFGA
KVKERPSGNK VVARPFQTDT LGLSPMAENN PAPEMIPTAV AAPQLINEDW VACDSCQKWR
LLPTGVTPDQ LPEKWLCSML YWLPGMNSCD ISEDETTKAL YALYQMPMSE GQNNLQTHAS
ETAFGVSFTD ALKFGLNQKN SSSDVLPDRG TKKHVFKEKM MSGKINAQAS GKNRSMNDVN
QHPTDSKPMK TMSSKHSSRF DNMIEDKHVS EEKEMQISGG SRKPIKLKRK MDADQSSSGT
PKKSKTEHVP YADRQSDPGM GLGKVVLNAR NSVPTKASRK DVGKYDEFGL PDDDDEDSLL
APVKKERDQV EVTSGVCSLD AKNTSKNGGL TRKRKFKDCP DDETEKHNRS SSLHGDKQCG
GGGNTSKLRM ESQHKILKQE AKSVAEGDDK LRKGEMRRVS LPGNQDQLTV ETEGRYTDKD
RQPMKRRKNV ASHQALDGIS PLGFGGQLAF AATSSSSKVS GSHKARTNFD DVKGSPVESV
TSSPLRSSNL DKRVSAARDI SVKDDSVKVS LSSRRSANNG EGKLSLRLKG NKILSNAHPA
PHKLSSEYQI KEAKDKIRVQ AKTSSEIKGN RLLGVPVEEH GNCANSMRHA EKVNKNNQNE
LSGKKPDKVT SLHSMEMNRR SGSQVGTDKM KVLASENCYS KNGGRHDSEV DPSHRSFGTE
TRNDAKYCSP MSKCEIDNIS QKSALRHGSI ETGKQTEVKQ KNFEKPVMNM DSQHSTGGTR
KTISQQNVTQ DVEEQNKVNH VSTESRDRKS KALGSADAEI KRETLTLPRY QKGDMSNEHP
VHAGNSGLTK LARLSADSSS NVLVNCSSGS VPPGQQLTVS SPVRTNANQT SVDILEEASK
LKVKADTYKN SGFDFESNET YFEAGLKFLH GASLVESCHN EISKHVEMSQ MQIYATAAKL
FKSCAFEYES RKEMAAAALA YKCMEVAYMR VVYCKHSSTN RDRCELQSTL QMVSQGESPS
SSASDVDNLN NQVAMDKATL PKGTNANVAS NHVISVRTRP SLVRLLDFTQ DINFAMEAAT
KCQCTFGAAN AMMEETRNRD CITSIRRVID FSFQDVDELV RLVRNATKAI SGAGLGGARD
//
