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Database: UniProt
Entry: A0A072VN68_MEDTR
LinkDB: A0A072VN68_MEDTR
Original site: A0A072VN68_MEDTR 
ID   A0A072VN68_MEDTR        Unreviewed;       157 AA.
AC   A0A072VN68;
DT   01-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   01-OCT-2014, sequence version 1.
DT   28-JUN-2023, entry version 30.
DE   RecName: Full=RNase H type-1 domain-containing protein {ECO:0000259|Pfam:PF13456};
GN   OrderedLocusNames=MTR_1g492920 {ECO:0000313|EMBL:KEH43434.1};
OS   Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC   NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX   NCBI_TaxID=3880 {ECO:0000313|EMBL:KEH43434.1, ECO:0000313|Proteomes:UP000002051};
RN   [1] {ECO:0000313|EMBL:KEH43434.1, ECO:0000313|Proteomes:UP000002051}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=A17 {ECO:0000313|EMBL:KEH43434.1}, and cv. Jemalong A17
RC   {ECO:0000313|EnsemblPlants:KEH43434,
RC   ECO:0000313|Proteomes:UP000002051};
RX   PubMed=22089132; DOI=10.1038/nature10625;
RA   Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA   Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA   Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA   Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA   Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA   Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA   Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA   Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA   Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA   Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA   Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA   Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA   Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA   Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA   Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA   Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA   Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA   Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA   Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA   Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA   Town C.D., Roe B.A.;
RT   "The Medicago genome provides insight into the evolution of rhizobial
RT   symbioses.";
RL   Nature 480:520-524(2011).
RN   [2] {ECO:0000313|EMBL:KEH43434.1, ECO:0000313|Proteomes:UP000002051}
RP   GENOME REANNOTATION.
RC   STRAIN=A17 {ECO:0000313|EMBL:KEH43434.1}, and cv. Jemalong A17
RC   {ECO:0000313|EnsemblPlants:KEH43434,
RC   ECO:0000313|Proteomes:UP000002051};
RX   PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA   Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA   Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA   Schwartz D.C., Town C.D.;
RT   "An improved genome release (version Mt4.0) for the model legume Medicago
RT   truncatula.";
RL   BMC Genomics 15:312-312(2014).
RN   [3] {ECO:0000313|EnsemblPlants:KEH43434}
RP   IDENTIFICATION.
RC   STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:KEH43434};
RG   EnsemblPlants;
RL   Submitted (APR-2015) to UniProtKB.
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DR   EMBL; CM001217; KEH43434.1; -; Genomic_DNA.
DR   RefSeq; XP_013469396.1; XM_013613942.1.
DR   AlphaFoldDB; A0A072VN68; -.
DR   EnsemblPlants; KEH43434; KEH43434; MTR_1g492920.
DR   Gramene; KEH43434; KEH43434; MTR_1g492920.
DR   HOGENOM; CLU_1680537_0_0_1; -.
DR   Proteomes; UP000002051; Chromosome 1.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR   CDD; cd06222; RNase_H_like; 1.
DR   InterPro; IPR044730; RNase_H-like_dom_plant.
DR   InterPro; IPR002156; RNaseH_domain.
DR   PANTHER; PTHR47723; OS05G0353850 PROTEIN; 1.
DR   PANTHER; PTHR47723:SF10; REVERSE TRANSCRIPTASE-LIKE PROTEIN; 1.
DR   Pfam; PF13456; RVT_3; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000002051}.
FT   DOMAIN          97..153
FT                   /note="RNase H type-1"
FT                   /evidence="ECO:0000259|Pfam:PF13456"
SQ   SEQUENCE   157 AA;  17665 MW;  19A60DFD18E4D240 CRC64;
     MAWKITTLQQ VLPVTVIDSI KSLVPPYHGY IDDSIAWKLT SDGEFDNRSV YPLLQDLEIH
     YQQRIFPLLW SWKAELWAIK RGLNLAISIL TSPYSCQSRR TSACGGAIGN CDGEFLLGFA
     ENIGTCTITS AELWAMKRGL NLAISRGYRL LLFNPIL
//
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