ID A0A077RYJ3_WHEAT Unreviewed; 209 AA.
AC A0A077RYJ3;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 24-JAN-2024, entry version 42.
DE RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
GN ORFNames=CFC21_040581 {ECO:0000313|EMBL:KAF7028713.1},
GN TRAES_3BF157000040CFD_c1 {ECO:0000313|EMBL:CDM82183.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EMBL:CDM82183.1};
RN [1] {ECO:0000313|EMBL:CDM82183.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=25035497; DOI=10.1126/science.1249721;
RA Choulet F., Alberti A., Theil S., Glover N., Barbe V., Daron J.,
RA Pingault L., Sourdille P., Couloux A., Paux E., Leroy P., Mangenot S.,
RA Guilhot N., Le Gouis J., Balfourier F., Alaux M., Jamilloux V., Poulain J.,
RA Durand C., Bellec A., Gaspin C., Safar J., Dolezel J., Rogers J.,
RA Vandepoele K., Aury J.M., Mayer K., Berges H., Quesneville H., Wincker P.,
RA Feuillet C.;
RT "Structural and functional partitioning of bread wheat chromosome 3B.";
RL Science 345:1249721-1249721(2014).
RN [2] {ECO:0000313|EMBL:KAF7028713.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7028713.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS3B02G164800.1.cds1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS3B02G164800.1.cds1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [4] {ECO:0000313|EnsemblPlants:TraesCS3B02G164800.1.cds1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [5] {ECO:0000313|EMBL:KAF7028713.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7028713.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; HG670306; CDM82183.1; -; Genomic_DNA.
DR EMBL; CM022218; KAF7028713.1; -; Genomic_DNA.
DR SMR; A0A077RYJ3; -.
DR STRING; 4565.A0A077RYJ3; -.
DR EnsemblPlants; TraesCS3B02G164800.1; TraesCS3B02G164800.1.cds1; TraesCS3B02G164800.
DR Gramene; TraesCAD_scaffold_008529_01G000200.1; TraesCAD_scaffold_008529_01G000200.1; TraesCAD_scaffold_008529_01G000200.
DR Gramene; TraesCLE_scaffold_045677_01G000100.1; TraesCLE_scaffold_045677_01G000100.1; TraesCLE_scaffold_045677_01G000100.
DR Gramene; TraesCS3B02G164800.1; TraesCS3B02G164800.1.cds1; TraesCS3B02G164800.
DR Gramene; TraesCS3B03G0394100.1; TraesCS3B03G0394100.1.CDS1; TraesCS3B03G0394100.
DR Gramene; TraesKAR3B01G0117900.1; cds.TraesKAR3B01G0117900.1; TraesKAR3B01G0117900.
DR Gramene; TraesPAR_scaffold_034273_01G000100.1; TraesPAR_scaffold_034273_01G000100.1; TraesPAR_scaffold_034273_01G000100.
DR Gramene; TraesROB_scaffold_031909_01G000100.1; TraesROB_scaffold_031909_01G000100.1; TraesROB_scaffold_031909_01G000100.
DR Gramene; TraesWEE_scaffold_021740_01G000300.1; TraesWEE_scaffold_021740_01G000300.1; TraesWEE_scaffold_021740_01G000300.
DR HOGENOM; CLU_013137_15_10_1; -.
DR OMA; HPWAIAS; -.
DR OrthoDB; 396225at2759; -.
DR Proteomes; UP000019116; Chromosome 3B.
DR Proteomes; UP000815260; Chromosome 3B.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd16461; RING-H2_EL5-like; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46539; E3 UBIQUITIN-PROTEIN LIGASE ATL42; 1.
DR PANTHER; PTHR46539:SF9; RING-H2 FINGER PROTEIN ATL56; 1.
DR Pfam; PF13639; zf-RING_2; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Reference proteome {ECO:0000313|Proteomes:UP000019116};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}; Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT TRANSMEM 23..47
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 98..140
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REGION 162..209
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 209 AA; 22609 MW; 2B61B7F52BC5A8BA CRC64;
MSSYIRPFQP GEAVAPCCST TTLLSALAAS FACCFFLVVI FLCLRFLHLR RTRRHSAQPL
QGQPQAPQPK HGLDAATIAL FPSFPYRRDS SASAPDECAV CLSAVDEGET VRQLPSCKHL
FHQECVDVWL LSNASCPVCR GKVERAAGAA ADQRERAAAS AAVVPIEMMD DETLSPSPST
SEPSVPERPG WFGRASGSRS GQETDLERQ
//