ID A0A078F574_BRANA Unreviewed; 397 AA.
AC A0A078F574;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF2097127.1};
DE SubName: Full=BnaA05g13520D protein {ECO:0000313|EMBL:CDY08267.1};
GN Name=BnaA05g13520D {ECO:0000313|EMBL:CDY08267.1};
GN ORFNames=DARMORV10_A05P17250.1 {ECO:0000313|EMBL:CAF2097127.1},
GN GSBRNA2T00125597001 {ECO:0000313|EMBL:CDY08267.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY08267.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY08267.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY08267.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF2097127.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; HG994359; CAF2097127.1; -; Genomic_DNA.
DR EMBL; LK031984; CDY08267.1; -; Genomic_DNA.
DR RefSeq; XP_013656412.1; XM_013800958.1.
DR RefSeq; XP_013708818.1; XM_013853364.1.
DR STRING; 3708.A0A078F574; -.
DR PaxDb; 3708-A0A078F574; -.
DR EnsemblPlants; CDY08267; CDY08267; GSBRNA2T00125597001.
DR GeneID; 106361237; -.
DR GeneID; 106412418; -.
DR Gramene; CDY08267; CDY08267; GSBRNA2T00125597001.
DR KEGG; bna:106361237; -.
DR KEGG; bna:106412418; -.
DR OMA; GCRVECG; -.
DR OrthoDB; 396831at2759; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0005739; C:mitochondrion; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 5.
DR PANTHER; PTHR47939; MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE; 1.
DR PANTHER; PTHR47939:SF8; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 2.
DR PROSITE; PS51375; PPR; 3.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 175..210
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 246..280
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 281..315
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 397 AA; 44555 MW; E414138E04584921 CRC64;
MSSLSRLLRG AFNTCTIRRF SSAAASETTA AISPPPKKSL SSIVNEERNP KRIVDKFKMA
CESERFRANI AVYDRTVRRL VAAKRLHFVK EILEEQKKYP DMSKEGFAAR IISLYGKAGL
VENAQKVFDE MPERNCKRSV LSFNALLSAY GVSKRFDVVE QLFNDLPKKL SIKPDIVSYN
TLIKALCEKG SLSEAVALLG DIENKGGLKP DIITFNTLLL SSYLKGEFEQ GEEIWAKMAE
KKVARDIRSY NARLLGLANQ TKSEELVSLF EELKASGIKP DVYSFNAMIR GSINKGKREE
AKTWYEEIVK QGYRPDKATL ALLIPALCKA EEFGCAIELC KETFSKRYLV GQTTLQELVN
ELVKGGKRGE AEEIVEIAKN NDFLKFKLDL SSSQLIS
//
