ID A0A078FA51_BRANA Unreviewed; 558 AA.
AC A0A078FA51;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE SubName: Full=BnaA03g01460D protein {ECO:0000313|EMBL:CDY11310.1};
GN Name=BnaA03g01460D {ECO:0000313|EMBL:CDY11310.1};
GN ORFNames=GSBRNA2T00049352001 {ECO:0000313|EMBL:CDY11310.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY11310.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY11310.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
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DR EMBL; LK032010; CDY11310.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A078FA51; -.
DR STRING; 3708.A0A078FA51; -.
DR PaxDb; 3708-A0A078FA51; -.
DR EnsemblPlants; CDY11310; CDY11310; GSBRNA2T00049352001.
DR Gramene; CDY11310; CDY11310; GSBRNA2T00049352001.
DR OMA; DAMPFRS; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 3.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR PANTHER; PTHR24015:SF1063; OS12G0156900 PROTEIN; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 3.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 1.
DR PROSITE; PS51375; PPR; 3.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 150..184
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 251..285
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 286..316
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 466..558
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 558 AA; 63638 MW; E62D94C42283A9D4 CRC64;
MNFLRQCRIL PRRIHACSLS RNLSVLVTYE QDDCSLERYN NEFWNRNVVQ ASDFIEILQL
CARNGNVLEA KACHGKIIRL EMHEDVITLS NVLINSYSKC GFAELARKVF DGMPCLDTHV
YVGTALLDLY AKCGMMKDSV QVFEFMQEKS SVTWSSMVAG YVQNKRYEEA LLLYRRGQRM
SLEKNQFTLS SVICACSNLA ALIEGKQMHA VIYKTGYASN VFVASSVVDM YAKCGGLRES
YIIFSEVGEK NIELWNTIIS GFAKHARPKE VMILFEKMQQ DGMRPNEVTF SSLLSVCAHT
GLVEEGRRFF RFMRSKYGVS PNVVHYSCMV DVLGRAGLLS EAYELIKSIP FDPTASIWGS
LLASCRVYKN LELAEVAAEK LFSLEPENAG NHVLLSNIYA ANNHWEDIVK SRKLLRDSEV
KKVRGKSWIE IKDKVHVFSV GESGHPRIRE ICLKLDSLVI ELRKFGYKPR VEHELHDVEE
RKKEELLMQH SEKLALVFGI MCLPEGSSVR IMKNLRICVD CHEFMKAASM ATGRLIIVRD
VNRFHHFSDG QCSCGEFW
//
