ID A0A078FCK4_BRANA Unreviewed; 487 AA.
AC A0A078FCK4;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 24-JAN-2024, entry version 30.
DE SubName: Full=BnaC03g60110D protein {ECO:0000313|EMBL:CDY12095.1};
GN Name=BnaC03g60110D {ECO:0000313|EMBL:CDY12095.1};
GN ORFNames=GSBRNA2T00061066001 {ECO:0000313|EMBL:CDY12095.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY12095.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY12095.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 10 (cellulase F) family.
CC {ECO:0000256|ARBA:ARBA00007495}.
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DR EMBL; LK032017; CDY12095.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A078FCK4; -.
DR STRING; 3708.A0A078FCK4; -.
DR PaxDb; 3708-A0A078FCK4; -.
DR EnsemblPlants; CDY12095; CDY12095; GSBRNA2T00061066001.
DR Gramene; CDY12095; CDY12095; GSBRNA2T00061066001.
DR OMA; WIRIKSA; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0031176; F:endo-1,4-beta-xylanase activity; IEA:UniProt.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR Gene3D; 2.60.120.260; Galactose-binding domain-like; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR InterPro; IPR008979; Galactose-bd-like_sf.
DR InterPro; IPR044846; GH10.
DR InterPro; IPR001000; GH10_dom.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR PANTHER; PTHR31490; GLYCOSYL HYDROLASE; 1.
DR PANTHER; PTHR31490:SF3; GLYCOSYL HYDROLASE FAMILY 10 PROTEIN; 1.
DR Pfam; PF00331; Glyco_hydro_10; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF49785; Galactose-binding domain-like; 1.
DR PROSITE; PS51760; GH10_2; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..24
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 25..487
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5001734404"
FT DOMAIN 168..429
FT /note="GH10"
FT /evidence="ECO:0000259|PROSITE:PS51760"
SQ SEQUENCE 487 AA; 54349 MW; E48ED669005CBA8A CRC64;
MKHSSIIAFI FSAIYSLLTA FVLASSSNDG PFYDSTAYTE CRAEPEKPLY NGGMLNEKEA
SVSGGDTLRS VGASYTPAYI LHNLTQNTIY CFSIWVKIKA GSASTARVRA KLRSDNATLN
CVGSVSAKQG CWSFLKGGFL LDSPSQLSIL FFETSNDDGR TQLEVASASL QPFTQEQWKN
NQDYFINTAR KRAVTIHVAG ESGESVEGAV VNVEQIAKDF PIGSAISKTI LGNIPYQNEL
KCLMTRYRGE FVHWDVSNEM LHFDFYESRL GKNASYELFA AARELDSLAT LFLNDFNVVE
TCSDERSTVD EYITRVRELE RYDGGGMRMD GVGLEGHFTR PNVALMRANL DKLATLELPV
WLTEIDISST LDHRTQAIYL EQVLREGFSH PSVNGIILWT ALHPNGCYQM CLTDDKFHNL
PAGDVVDQKL LEWTTGEVKA KTDDHGTFSF LGFLGEYRVS IMYEGKTVNS SFSLSRDPET
KHVRLRI
//