ID A0A078GFC6_BRANA Unreviewed; 818 AA.
AC A0A078GFC6;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF1801375.1};
DE SubName: Full=BnaC04g02050D protein {ECO:0000313|EMBL:CDY23832.1};
GN Name=BnaC04g02050D {ECO:0000313|EMBL:CDY23832.1};
GN ORFNames=DARMORV10_C04P02890.1 {ECO:0000313|EMBL:CAF1801375.1},
GN GSBRNA2T00024247001 {ECO:0000313|EMBL:CDY23832.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY23832.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY23832.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY23832.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF1801375.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; HG994368; CAF1801375.1; -; Genomic_DNA.
DR EMBL; LK032150; CDY23832.1; -; Genomic_DNA.
DR STRING; 3708.A0A078GFC6; -.
DR PaxDb; 3708-A0A078GFC6; -.
DR EnsemblPlants; CDY23832; CDY23832; GSBRNA2T00024247001.
DR Gramene; CDY23832; CDY23832; GSBRNA2T00024247001.
DR OMA; REVFLMM; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 7.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 12.
DR PANTHER; PTHR47447; OS03G0856100 PROTEIN; 1.
DR PANTHER; PTHR47447:SF30; PPR CONTAINING PLANT PROTEIN; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF13041; PPR_2; 4.
DR Pfam; PF13812; PPR_3; 3.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 14.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 141..175
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 176..210
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 211..245
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 246..280
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 281..311
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 319..353
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 354..388
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 389..423
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 424..458
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 494..528
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 529..563
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 564..600
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 601..635
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 741..775
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 1..23
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 818 AA; 91767 MW; BADBD3CBC59A964C CRC64;
MATVTHLVSP PESSRAYRPR AAAKTSDALR EKKSVYVNYD RGEHEVSVRV TGFRKADIAR
RYRVRVENDR FQKDWSVSEV ADRLIALNRW EEVDGVLNSW VGRFARKNFP ILIGELGRRG
CIDLCVNVFN WMKNQKNYCA RNDIYNTMIR LHARCNRVDQ ARGLFFEMQK WSCKPDAETY
NALINAHGRA GQWRWAMNLM DDMLRAAIAP SRTTYNNLIN ACGSSGNWRE ALEVCKKMTD
NGVGPDLVTH NIVLSAYKSG RQFSKALSYF ELMKGAKVRP DTTTFNIVIY CLSKLGQTSQ
ALDVFNSMRE KKRAECRPDV VTFTSVMHLY SVRGEVESCR AVFEAMVAEG LKPNIVSYNA
LMGAYAVHGM SENALSVFQE IKRNGMVPDV VSYTCLLNSY GRSGQPGKAR EVFLMMRKER
RKPNVVTYNA LIDAYGSNGL LPEAVGVFRQ MEQDGVKPNV VSVSTLLAAC SRSGKKVNVE
TVLSAAETRG IKLNTAAYNS AIGSFINGAE LEKAVALYRT MSRKKVKADS VTFTVLISGS
CRMSKYPEAV SYLKDMEELG VPMTKEVYSS VLCAYSKQAS GQVTEAESIF KQMKKDGCKP
DVIAYTSMLH AYNASEKWEK ACELFLEMEE NGVEPDSIAC SALMRAFNKG GQPSNVFILM
DLMREKEVPF TGAVFFEIFS ACNTLQEWKR AIDLIQMMEP YLPSLSIGLT NQMLHLFGKS
GKVEAMMKLF YKLIASGVGI NLETYSVLLE HLLAVGNWRK YIEVLEWMSD GGIQPSTQMY
RDIISFGERS AGIEFEPLIR QKLASLRNKG GGDLSKAH
//
