ID A0A078H2U6_BRANA Unreviewed; 562 AA.
AC A0A078H2U6;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 47.
DE SubName: Full=BnaC09g13120D protein {ECO:0000313|EMBL:CDY31837.1};
GN Name=BnaC09g13120D {ECO:0000313|EMBL:CDY31837.1};
GN ORFNames=GSBRNA2T00050544001 {ECO:0000313|EMBL:CDY31837.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY31837.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY31837.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
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DR EMBL; LK032280; CDY31837.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A078H2U6; -.
DR STRING; 3708.A0A078H2U6; -.
DR PaxDb; 3708-A0A078H2U6; -.
DR EnsemblPlants; CDY31837; CDY31837; GSBRNA2T00050544001.
DR Gramene; CDY31837; CDY31837; GSBRNA2T00050544001.
DR OMA; LEQQEYC; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR Gene3D; 1.10.260.100; -; 2.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR041243; STI1/HOP_DP.
DR InterPro; IPR006636; STI1_HS-bd.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR001440; TPR_1.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR22904:SF536; STI1 DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR22904; TPR REPEAT CONTAINING PROTEIN; 1.
DR Pfam; PF17830; STI1-HOP_DP; 2.
DR Pfam; PF00515; TPR_1; 1.
DR Pfam; PF13414; TPR_11; 2.
DR Pfam; PF13181; TPR_8; 1.
DR SMART; SM00727; STI1; 2.
DR SMART; SM00028; TPR; 9.
DR SUPFAM; SSF48452; TPR-like; 3.
DR PROSITE; PS50005; TPR; 6.
DR PROSITE; PS50293; TPR_REGION; 1.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW TPR repeat {ECO:0000256|ARBA:ARBA00022803, ECO:0000256|PROSITE-
KW ProRule:PRU00339}.
FT REPEAT 2..35
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 70..103
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT DOMAIN 131..170
FT /note="STI1"
FT /evidence="ECO:0000259|SMART:SM00727"
FT REPEAT 228..261
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 373..406
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 407..440
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 441..474
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT DOMAIN 511..550
FT /note="STI1"
FT /evidence="ECO:0000259|SMART:SM00727"
FT REGION 108..130
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 193..222
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 197..211
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 562 AA; 63549 MW; E171FA04F64C7161 CRC64;
MADEAKAKGN AAFSSGDFAS AVTHFTDAIN LAPTNHVLFS NRSAAHASLH QYEKALSDAK
KTVELKPDWA KGYSRLGAAH LGLNHHEEAV EAYSKGLEID PSNEALKSGL ADASRSRAAP
PPNPFGDAFK GPEMWAKLTA DPSTRGFLKQ PDFVNMMQEI QRNPSSLNLY LKDQRVMQSL
GVLLNVQFRT QTGDEAEGAR EEDEMVVNEP PEPEVAEEKE KKERREKALK EKEMGNAAYK
KKDFETAIKH YSTAIEIDDE DISFITNRAA VHLEMGKYDE CIKYDECIKD CDKAVERGRE
LRSDYKMVAK ALTRKGTALG KMAKVSKDYE PVIETYQKAL TEHRNPDTLK RLNEAERAKK
ELEQQEYFDP AIGDEEREKG NQFFKEQKYP DAVRHYTEAI KRNPKDPRAY SNRAACYTKL
GAMPEGLKDA EKCIELDPTF SKGYSRKGAV QFFMKEYDNA METYQEGLKH DPNNQELLDG
VRRCVQQINK ANRGDLTPEE LKERQAKGMQ DPEIQNILTD PVMRQVLSDL QENPAAAQKH
MQNPMIMNKI QKLISSGIVQ MK
//
