ID A0A078HMJ1_BRANA Unreviewed; 634 AA.
AC A0A078HMJ1;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE SubName: Full=BnaA05g12930D protein {ECO:0000313|EMBL:CDY38564.1};
GN Name=BnaA05g12930D {ECO:0000313|EMBL:CDY38564.1};
GN ORFNames=GSBRNA2T00066234001 {ECO:0000313|EMBL:CDY38564.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY38564.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY38564.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
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DR EMBL; LK032426; CDY38564.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A078HMJ1; -.
DR STRING; 3708.A0A078HMJ1; -.
DR PaxDb; 3708-A0A078HMJ1; -.
DR EnsemblPlants; CDY38564; CDY38564; GSBRNA2T00066234001.
DR Gramene; CDY38564; CDY38564; GSBRNA2T00066234001.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR InterPro; IPR004864; LEA_2.
DR PANTHER; PTHR31234; LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY; 1.
DR PANTHER; PTHR31234:SF2; OS01G0574800 PROTEIN; 1.
DR Pfam; PF03168; LEA_2; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 64..90
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 122..207
FT /note="Late embryogenesis abundant protein LEA-2 subgroup"
FT /evidence="ECO:0000259|Pfam:PF03168"
FT REGION 1..58
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 634 AA; 71505 MW; EA4A55D9A4210B3C CRC64;
MSDHQKIHPV SDPEAPPPAH PTAPLVPRGS SRSEHGDPTK ESVTQPPLLD TPPRKKRGSC
CCRCVCYTLL VIFLLIVIVG AAVGILYLVF RPKLPDYNID RLQLTRFTLN QDSSLSTAFN
VTITAKNPNE KIGIYYEDGS RISVLYMQTR LSNGSLPKFY QGHENTTIIF VEMTGYTQNA
TSLMATLQEQ QQLTGSIPLR IRVIQPVRIK LGKLKLMEVK FMFMVRYGVS VDSLAANNVI
SVRSNQPCLS FFTFKESASH HQFRVVSLSL LHQVTKKAHQ SAGSLISDWF GLVLPLIRSD
LTSGPAFIRL LGWFSSVSPF IMLCFVLAIS YTYMGSSISY VLLIWQISKG KISSMRMRMN
LFTWNPLAPL DGGNLKNIGG KIGNIDTMEL SEGRLLVDLD TRKALVFTKK EMIVIIISHN
GRQLLKSSEI ISYRTSHSKN QHNNRFERNA RRYDYNQERA LRRPGDNRWF RPAPRQSRPY
VPYEHKNEHK KLQTRREYDK RADFGKSVPD DPISSQLKVS HTGRKLASII ITPSREDFAS
EINVTFHNKG AARAITFSPT EKDNLYNAPD NGQVVGTLQG MEIGDSTTIV DQQNETMVEC
DVLGDDLLGE ELEAMEEAVF CFVLNEAVFN NYTL
//
