ID A0A078HPP4_BRANA Unreviewed; 822 AA.
AC A0A078HPP4;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF1830128.1};
DE SubName: Full=BnaC04g15300D protein {ECO:0000313|EMBL:CDY39531.1};
GN Name=BnaC04g15300D {ECO:0000313|EMBL:CDY39531.1};
GN ORFNames=DARMORV10_C04P21870.1 {ECO:0000313|EMBL:CAF1830128.1},
GN GSBRNA2T00068064001 {ECO:0000313|EMBL:CDY39531.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY39531.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY39531.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY39531.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF1830128.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000256|ARBA:ARBA00001947};
CC -!- SIMILARITY: In the C-terminal section; belongs to the peptidase M41
CC family. {ECO:0000256|ARBA:ARBA00010044}.
CC -!- SIMILARITY: In the N-terminal section; belongs to the AAA ATPase
CC family. {ECO:0000256|ARBA:ARBA00010550}.
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DR EMBL; HG994368; CAF1830128.1; -; Genomic_DNA.
DR EMBL; LK032450; CDY39531.1; -; Genomic_DNA.
DR STRING; 3708.A0A078HPP4; -.
DR MEROPS; M41.022; -.
DR PaxDb; 3708-A0A078HPP4; -.
DR EnsemblPlants; CDY39531; CDY39531; GSBRNA2T00068064001.
DR Gramene; CDY39531; CDY39531; GSBRNA2T00068064001.
DR OMA; GFHNDER; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0005745; C:m-AAA complex; IBA:GO_Central.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.
DR GO; GO:0004222; F:metalloendopeptidase activity; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0034982; P:mitochondrial protein processing; IBA:GO_Central.
DR CDD; cd19501; RecA-like_FtsH; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.40.1690.20; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 1.20.58.760; Peptidase M41; 1.
DR HAMAP; MF_01458; FtsH; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR041569; AAA_lid_3.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR003960; ATPase_AAA_CS.
DR InterPro; IPR005936; FtsH.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR011546; Pept_M41_FtsH_extracell.
DR InterPro; IPR000642; Peptidase_M41.
DR InterPro; IPR037219; Peptidase_M41-like.
DR NCBIfam; TIGR01241; FtsH_fam; 1.
DR PANTHER; PTHR43655; ATP-DEPENDENT PROTEASE; 1.
DR PANTHER; PTHR43655:SF35; ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 3, MITOCHONDRIAL; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF17862; AAA_lid_3; 1.
DR Pfam; PF06480; FtsH_ext; 1.
DR Pfam; PF01434; Peptidase_M41; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF140990; FtsH protease domain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00674; AAA; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Metalloprotease {ECO:0000256|ARBA:ARBA00023049};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Protease {ECO:0000256|ARBA:ARBA00022670};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989}.
FT DOMAIN 368..507
FT /note="AAA+ ATPase"
FT /evidence="ECO:0000259|SMART:SM00382"
FT REGION 85..118
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 787..822
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 85..115
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 807..822
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 822 AA; 90369 MW; AB4D3580CF9B299F CRC64;
MTMFFSKLGR SSVSRSRGFL YGGGVRSLRL IGPPANQGGG LGFLSRHFAS LTGRKGLLDN
DLIGVFANPR LGRFFSDEAP KKKNYENYFP KAPKQEEPKS DQKSESKEGS DKNENENLGD
MFANRFQNLL IPLLALAIFL SSFSFGSGDQ QQAKHLYSKL CNILESCISF QEFKNKLLEP
GLVDHIDVSN KSVAKVYVRS TPRDQQTSQD VVIQGNGNAQ GIPAKRTGGQ YKYYFNIGSV
DSFEEKLEEA QEALGIDPHH FVPVTYTTEM VWFQEFLRFA PTLLLLGTLV YGARRMQGGI
GGLGGTGGKN GRGIFNIGKA TITRADKNSK NKIYFKDVAG CEEAKQEIME FVHFLKNPKK
YEDLGAKIPK GALLVGPPGT GKTLLAKATA GESGVPFLSI SGSDFMEMFV GVGPSRVRNL
FQEARQAAPS IIFIDEIDAI GRARGRGGLG GNDERESTLN QLLVEMDGFG TTAGVVVLAG
TNRPDILDKA LLRPGRFDRQ ITIDKPDIKG RDQIFQIYLK KIKLDHEPSY YSQRLAALTP
GFAGADIANV CNEAALIAAR HEGATVTMAH FESAIDRVIG GLEKKNRVIS KLERRTVAYH
ESGHAVAGWF LEHAEPLLKV TIVPRGTAAL GFAQYVPNEN LLMTKEQLFD MTCMTLGGRA
AEQVLIGKIS TGAQNDLEKV TKMTYAQVAV YGFSDKVGLL SFPPRDDGYD FNKPYSNKTG
AIIDEEVREW VGKAYEKTVE LIETHKEKVA EIAELLLEKE VLHQDDLLKV LGERPFKPAE
VTNYDRFKSG FEENEKEEAT PTVAPVVDEG APPPLEPQVV PT
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