ID A0A078HTX8_BRANA Unreviewed; 471 AA.
AC A0A078HTX8;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF2146214.1};
DE SubName: Full=BnaA01g05620D protein {ECO:0000313|EMBL:CDY41990.1};
GN Name=BnaA01g05620D {ECO:0000313|EMBL:CDY41990.1};
GN ORFNames=DARMORV10_A01P00510.1 {ECO:0000313|EMBL:CAF2146214.1},
GN GSBRNA2T00073989001 {ECO:0000313|EMBL:CDY41990.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY41990.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY41990.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY41990.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF2146214.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; HG994355; CAF2146214.1; -; Genomic_DNA.
DR EMBL; LK032511; CDY41990.1; -; Genomic_DNA.
DR STRING; 3708.A0A078HTX8; -.
DR PaxDb; 3708-A0A078HTX8; -.
DR EnsemblPlants; CDY41990; CDY41990; GSBRNA2T00073989001.
DR Gramene; CDY41990; CDY41990; GSBRNA2T00073989001.
DR OMA; GTITHPR; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0003729; F:mRNA binding; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR044179; PPR5-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR47874; EXPRESSED PROTEIN; 1.
DR PANTHER; PTHR47874:SF5; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PPR5 HOMOLOG, CHLOROPLASTIC; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 2.
DR PROSITE; PS51375; PPR; 6.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 128..162
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 203..237
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 238..272
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 273..307
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 308..342
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 413..447
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 471 AA; 54345 MW; C3BA230B3CDED9DB CRC64;
MAVDYLLTSP STLRFSDFIS SFSPNTNHKC LRFSPKPSSA RITCGAVSSK RKLAEREIAE
RENRVLVRNL MSRISDREPL VKTLDKYVKV VRCEHCFLLF EELGKSDKWL QCLEVFRWMQ
KQRWYIADNG VYSKLISVMG KKGQTRMAMW LFSEMKNSGC RPDASVYNAL ITAHLHTRDK
AKALEKVLGY FDKMKGMERC QPNVVTYNIL LRAFAQSGKV DQVNALFKDL DMSAVSPDVY
TFNGVMDAYG KNGMIKEMES VLTRMRSNEC KPDIITFNLL IDSYGKKQEF EKMEQTFKSL
MRSKEKPTLP TFNSMIINYG KARLRDKAEW VFEKMNDMNY APSFITYECM IMMYGYCGCV
SRAREVFEEV VESERVLKAS TLNAMLEVYC LNGLHMEADK LFHNASGFRV HPDASTYKLL
YKAYTKADMK ENVQMLMKKM EKDGIVPNKR FFLEALEAFG SRLPGSDSAM R
//
