ID A0A078IYT6_BRANA Unreviewed; 940 AA.
AC A0A078IYT6;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF2073135.1};
DE SubName: Full=BnaC01g41970D protein {ECO:0000313|EMBL:CDY54298.1};
GN Name=BnaC01g41970D {ECO:0000313|EMBL:CDY54298.1};
GN ORFNames=DARMORV10_C01P27210.1 {ECO:0000313|EMBL:CAF2073135.1},
GN GSBRNA2T00013784001 {ECO:0000313|EMBL:CDY54298.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY54298.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY54298.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY54298.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF2073135.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; HG994365; CAF2073135.1; -; Genomic_DNA.
DR EMBL; LK033300; CDY54298.1; -; Genomic_DNA.
DR RefSeq; XP_013688297.1; XM_013832843.1.
DR STRING; 3708.A0A078IYT6; -.
DR PaxDb; 3708-A0A078IYT6; -.
DR EnsemblPlants; CDY54298; CDY54298; GSBRNA2T00013784001.
DR GeneID; 106392066; -.
DR Gramene; CDY54298; CDY54298; GSBRNA2T00013784001.
DR KEGG; bna:106392066; -.
DR OMA; EEGEMNC; -.
DR OrthoDB; 456362at2759; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 3.30.40.100; -; 1.
DR InterPro; IPR011124; Znf_CW.
DR PANTHER; PTHR46524:SF12; CW-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR46524; CW-TYPE ZINC FINGER; 1.
DR Pfam; PF07496; zf-CW; 1.
DR PROSITE; PS51050; ZF_CW; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 407..460
FT /note="CW-type"
FT /evidence="ECO:0000259|PROSITE:PS51050"
FT REGION 107..129
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 176..205
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 473..494
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 540..582
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 107..126
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 178..193
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 478..494
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 552..570
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 940 AA; 103376 MW; C4776AE61A7C67E6 CRC64;
MGESYELEEG EFNCSAIYDL DVDLSYIDKK IENVLGDLQK KFELGSLDMF GPQVYKYGSF
LPTYKRSPAV PPCQRSFMEN NNAQRFPNNL PVKNVVQKFQ SLPATSCKPA SIQDSKTNQS
SGSLLPHAPG KVTIKKEDAR IPGNDSSDHK PIRLRIKMGS KILSQKVTMV CKDLGLDDSP
TRNSHDDSSR MLPHTSLEKT SESPSRILQE MTAIPVPEDL LMSPLPENLL NLKDKEKRST
LLGNEPVTKP GKVPFIQTQN KFSDVLGCGE TPSGRRKRKA VDCFNATTLN ETSSIGEVKK
QKVSSTGALA RESTTCGINS TSDGFTRKSN LQKGIKKDVE GDPRVSIAKS NRMKVVGKHA
EKEKKIYPIK LKQNSSKSSF GDKVLSKMPS KDTENKVDFA LAPASTSLDL DSWAECDTCK
KWRLLPFSEN PDKLPDKWVC SMQTWLPGMN HCRISQEETT NAIISTHGAK VHGPETSNAD
KSYHQSLTSG SLPNLIERKP QGVSSKIMVD AAKPTKSTSQ VLKIKNIKLP LKTCNAAQIS
TDQKAKGRSA GIQIKIKKEK DGDNQESESS KQIKTGDGNK LSRDLKAEEI HCKRDLDCTP
AERKTKRHDN DLYPSDVERV TKKRLLKPDH QPQPTTGSGS LCIKAHGIVS TPARKFGDLS
CSSLKTFLEN RAGVTNVNGI THETMDRSSK SANDILQEAE KLKKLADCFK NSGFDNEYKE
VNFDAALKFL LGASIMEMSS TEKVEDGRMS HVEAYHTAAK LSESCAHQYE TKKEMSAAAL
AYKCVEVACM RVVYCRSLGL SGELNELQKM VQMTPQGESP SSSASDVDSF CRQGVIDKSA
KTKRGLSHGV GTLLPVARNH QSFVPLLEVT ESMNLAMEAS AKSQQALGAV TVVTSEETLH
KDCVSAIKKV VDFSFHDVEA LIQMIEVARD VLSSSKVRGP
//
