GenomeNet

Database: UniProt
Entry: A0A078IZL6_BRANA
LinkDB: A0A078IZL6_BRANA
Original site: A0A078IZL6_BRANA 
ID   A0A078IZL6_BRANA        Unreviewed;       230 AA.
AC   A0A078IZL6;
DT   29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   29-OCT-2014, sequence version 1.
DT   24-JAN-2024, entry version 28.
DE   SubName: Full=BnaA05g11750D protein {ECO:0000313|EMBL:CDY10761.1};
DE   SubName: Full=BnaC02g44340D protein {ECO:0000313|EMBL:CDY56100.1};
GN   Name=BnaC02g44340D {ECO:0000313|EMBL:CDY56100.1};
GN   Synonyms=BnaA05g11750D {ECO:0000313|EMBL:CDY10761.1};
GN   ORFNames=GSBRNA2T00017815001 {ECO:0000313|EMBL:CDY56100.1},
GN   GSBRNA2T00048581001 {ECO:0000313|EMBL:CDY10761.1};
OS   Brassica napus (Rape).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX   NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY56100.1, ECO:0000313|Proteomes:UP000028999};
RN   [1] {ECO:0000313|EMBL:CDY56100.1, ECO:0000313|Proteomes:UP000028999}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX   PubMed=25146293; DOI=10.1126/science.1253435;
RA   Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA   Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA   Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA   Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA   Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA   Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA   Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA   Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA   Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA   Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA   Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA   Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA   Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT   "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT   Brassica napus oilseed genome.";
RL   Science 345:950-953(2014).
RN   [2] {ECO:0000313|EMBL:CDY56100.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Genoscope - CEA;
RL   Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; LK032006; CDY10761.1; -; Genomic_DNA.
DR   EMBL; LK033457; CDY56100.1; -; Genomic_DNA.
DR   STRING; 3708.A0A078IZL6; -.
DR   PaxDb; 3708-A0A078IZL6; -.
DR   EnsemblPlants; CDY10761; CDY10761; GSBRNA2T00048581001.
DR   EnsemblPlants; CDY56100; CDY56100; GSBRNA2T00017815001.
DR   Gramene; CDY10761; CDY10761; GSBRNA2T00048581001.
DR   Gramene; CDY56100; CDY56100; GSBRNA2T00017815001.
DR   Proteomes; UP000028999; Unassembled WGS sequence.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR   InterPro; IPR027934; CES_Znf_RING.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   PANTHER; PTHR13301:SF31; CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 8 [UDP-FORMING]; 1.
DR   PANTHER; PTHR13301; X-BOX TRANSCRIPTION FACTOR-RELATED; 1.
DR   Pfam; PF14569; zf-UDP; 1.
DR   SUPFAM; SSF57850; RING/U-box; 1.
PE   4: Predicted;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        172..191
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        197..218
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          3..45
FT                   /note="Cellulose synthase RING-type zinc finger"
FT                   /evidence="ECO:0000259|Pfam:PF14569"
FT   REGION          112..139
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   230 AA;  26052 MW;  3D178B6D537B2141 CRC64;
     MMESKSPVCN TCGEETGVES NGEFFVACHE CSFPICKACV EICLRCGKPY DENVLDDVET
     KTSKHQSTVA THISNTPQDS GIHARHISTV STIDKLNDEY RNPIWKNRVD SWKDKKSKKK
     KKHAKATKAE DPDAQVPPQQ HMEDISLNAE AASATDVLSV VIPIPRTKIT SYRIVIIMRL
     TILALFFHYR ITHPVDSAYV LLLTSVICEI WFAFSWVLDQ FPKWSPINRT
//
DBGET integrated database retrieval system