ID A0A078J4G0_BRANA Unreviewed; 559 AA.
AC A0A078J4G0;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF1768044.1};
DE SubName: Full=BnaCnng31920D protein {ECO:0000313|EMBL:CDY57386.1};
GN Name=BnaCnng31920D {ECO:0000313|EMBL:CDY57386.1};
GN ORFNames=DARMORV10_C09P50310.1 {ECO:0000313|EMBL:CAF1768044.1},
GN GSBRNA2T00020928001 {ECO:0000313|EMBL:CDY57386.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY57386.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY57386.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY57386.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF1768044.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; HG994373; CAF1768044.1; -; Genomic_DNA.
DR EMBL; LK033571; CDY57386.1; -; Genomic_DNA.
DR RefSeq; XP_013671807.1; XM_013816353.1.
DR STRING; 3708.A0A078J4G0; -.
DR PaxDb; 3708-A0A078J4G0; -.
DR EnsemblPlants; CDY57386; CDY57386; GSBRNA2T00020928001.
DR GeneID; 106376286; -.
DR Gramene; CDY57386; CDY57386; GSBRNA2T00020928001.
DR KEGG; bna:106376286; -.
DR OMA; NHWGKVI; -.
DR OrthoDB; 5488895at2759; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0005768; C:endosome; IEA:UniProt.
DR GO; GO:0016020; C:membrane; IEA:UniProt.
DR GO; GO:0035091; F:phosphatidylinositol binding; IEA:InterPro.
DR CDD; cd07596; BAR_SNX; 1.
DR CDD; cd06865; PX_SNX_like; 1.
DR Gene3D; 1.20.1270.60; Arfaptin homology (AH) domain/BAR domain; 1.
DR Gene3D; 3.30.1520.10; Phox-like domain; 1.
DR InterPro; IPR027267; AH/BAR_dom_sf.
DR InterPro; IPR001683; PX_dom.
DR InterPro; IPR036871; PX_dom_sf.
DR InterPro; IPR044279; SNX2A/B.
DR InterPro; IPR015404; Vps5_C.
DR PANTHER; PTHR46757:SF2; SORTING NEXIN 2A; 1.
DR PANTHER; PTHR46757; SORTING NEXIN-RELATED; 1.
DR Pfam; PF00787; PX; 1.
DR Pfam; PF09325; Vps5; 1.
DR SMART; SM00312; PX; 1.
DR SUPFAM; SSF64268; PX domain; 1.
DR PROSITE; PS50195; PX; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999}.
FT DOMAIN 130..249
FT /note="PX"
FT /evidence="ECO:0000259|PROSITE:PS50195"
FT REGION 1..81
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 94..125
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 442..515
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 34..77
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 95..125
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 559 AA; 62022 MW; D581C6257D989124 CRC64;
MMGSENADGF EETNLNVPKE EMENLVLNGD GAGDGTGDSS NSAYRSAMST LSNVHDPLSP
LPTVLTPANS DPLTAPSSYI EPPSYADVIF SPFDETSDSE INGGEDSSLS PDSLSRSPSS
SSSDYIKITV SNPQKEQETS NSIVGGNTYI TYQITTRTNL PDFGVSESSV RRRFRDVVTL
ADRLAESYRG FCIPPRPDKS VVESQVMQKQ EFVEQRRVAL EKYLRRLSAH PVIRKSDELK
VFLQVQGKLP LPMSTDVASR MLDGAVKLPK QLFGEGGASA VPVHEVVQPA RGGRDLLRLF
KELRQSVSND WGGSKPAVVE EDKEFLEKKE KMLDLEQQII NSSQQAESLV KAQQDMGETM
GELGLAFIKL TKFENEEAVF NSQRTRATDM KNLATAAVKA SRFYRELNSQ TVKHLDTLHE
YLGMMMAVQG AFADRSSALL TVQTLLSELS SLQARAEKLE AASSKVFGGD KSRIRKIEEL
KETIKVTEDA KNVAIREYER IKDNNRSEVE RLDGERRADF MNMMKGFVVN QVGYAEKISN
VWAKAAEETS QYDREKQSS
//
