ID A0A078J833_BRANA Unreviewed; 532 AA.
AC A0A078J833;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE SubName: Full=(rape) hypothetical protein {ECO:0000313|EMBL:CAF1783625.1};
DE SubName: Full=BnaC09g54720D protein {ECO:0000313|EMBL:CDY60930.1};
GN Name=BnaC09g54720D {ECO:0000313|EMBL:CDY60930.1};
GN ORFNames=DARMORV10_C09P61840.1 {ECO:0000313|EMBL:CAF1783625.1},
GN GSBRNA2T00030267001 {ECO:0000313|EMBL:CDY60930.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY60930.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY60930.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
RN [2] {ECO:0000313|EMBL:CDY60930.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAF1783625.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope - CEA;
RA William W.;
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; HG994373; CAF1783625.1; -; Genomic_DNA.
DR EMBL; LK033932; CDY60930.1; -; Genomic_DNA.
DR RefSeq; XP_013681222.1; XM_013825768.1.
DR RefSeq; XP_013681223.1; XM_013825769.1.
DR RefSeq; XP_013681224.1; XM_013825770.1.
DR RefSeq; XP_013681225.1; XM_013825771.1.
DR RefSeq; XP_013681227.1; XM_013825773.1.
DR RefSeq; XP_013720971.1; XM_013865517.1.
DR RefSeq; XP_013720972.1; XM_013865518.1.
DR RefSeq; XP_013720973.1; XM_013865519.1.
DR RefSeq; XP_013720974.1; XM_013865520.1.
DR RefSeq; XP_013720975.1; XM_013865521.1.
DR STRING; 3708.A0A078J833; -.
DR PaxDb; 3708-A0A078J833; -.
DR EnsemblPlants; CDY60930; CDY60930; GSBRNA2T00030267001.
DR GeneID; 106424771; -.
DR Gramene; CDY60930; CDY60930; GSBRNA2T00030267001.
DR KEGG; bna:106424771; -.
DR OMA; WYSPSIE; -.
DR OrthoDB; 731814at2759; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0010468; P:regulation of gene expression; IBA:GO_Central.
DR CDD; cd22459; KH-I_PEPPER_rpt1_like; 2.
DR CDD; cd22460; KH-I_PEPPER_rpt2_like; 2.
DR Gene3D; 3.30.310.210; -; 2.
DR InterPro; IPR004087; KH_dom.
DR InterPro; IPR004088; KH_dom_type_1.
DR InterPro; IPR036612; KH_dom_type_1_sf.
DR PANTHER; PTHR10288:SF352; K HOMOLOGY DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR10288; KH DOMAIN CONTAINING RNA BINDING PROTEIN; 1.
DR Pfam; PF00013; KH_1; 4.
DR SMART; SM00322; KH; 4.
DR SUPFAM; SSF54791; Eukaryotic type KH-domain (KH-domain type I); 4.
DR PROSITE; PS50084; KH_TYPE_1; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00117}.
FT DOMAIN 41..125
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 137..212
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 267..343
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 353..428
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT REGION 1..36
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 463..482
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 513..532
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 532 AA; 57769 MW; 3751D6B61DEFE988 CRC64;
MSPEHRDTHW KRSRPQSDDD DNGENKRRHR GCGDDRDSPA IDTVFRYLCP VKKIGSVIGR
GGDIVKQLRM ETKAKIKIGE AVPGCDERVV TIFSASDATN DGGDGERVLF SPAQDALFRV
HDRVVAADGG DGSDGERNVT AKMLVPSDQI GCVLGRGGQV VQNIRSETGA HIRIIKDRNM
PLCALSSDEL IQISGEVLIV KKALHQIASR LHENPSRTQN LLSSAPPLMS HSGGPRIVGI
APLMDPYARD LSRPLYQTLR NEPPAATDFY IRLVSPADNI AGVIGKGGAL INQLRQETRA
TIKVDSARTD GNDCLITISA REVFDDTYSP TIEAAMRLQS KCSDKVERDS GLVSFTTRLL
VPSSRIGCLL GKGGAIITEM RRMTKANIRV LGKDNLPKVA SEDDEMVQIS GELDVAKDAL
IQITSRLRAN VFDRDGSVST LMPVLPYVPV ALDAGDRLDY DRRDSRRAER PNHYPGGYGS
SGLSEGYSRY GAPVGGSSST QYGVYGGYAS GRSGSSGLSS YSSSLRRRNY DY
//
