ID A0A078JF49_BRANA Unreviewed; 1217 AA.
AC A0A078JF49;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 24-JAN-2024, entry version 39.
DE RecName: Full=Structural maintenance of chromosomes protein {ECO:0000256|PIRNR:PIRNR005719};
GN Name=BnaC03g72770D {ECO:0000313|EMBL:CDY63610.1};
GN ORFNames=GSBRNA2T00039466001 {ECO:0000313|EMBL:CDY63610.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY63610.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY63610.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PIRNR:PIRNR005719}.
CC -!- SIMILARITY: Belongs to the SMC family. {ECO:0000256|PIRNR:PIRNR005719}.
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DR EMBL; LK034326; CDY63610.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A078JF49; -.
DR STRING; 3708.A0A078JF49; -.
DR PaxDb; 3708-A0A078JF49; -.
DR EnsemblPlants; CDY63610; CDY63610; GSBRNA2T00039466001.
DR Gramene; CDY63610; CDY63610; GSBRNA2T00039466001.
DR OMA; DEQERSW; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0005694; C:chromosome; IEA:InterPro.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0061775; F:cohesin loader activity; IBA:GO_Central.
DR GO; GO:0003690; F:double-stranded DNA binding; IBA:GO_Central.
DR GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR GO; GO:0051321; P:meiotic cell cycle; IEA:UniProtKB-KW.
DR GO; GO:0007064; P:mitotic sister chromatid cohesion; IBA:GO_Central.
DR CDD; cd03272; ABC_SMC3_euk; 1.
DR Gene3D; 1.20.1060.20; -; 1.
DR Gene3D; 3.30.70.1620; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR003395; RecF/RecN/SMC_N.
DR InterPro; IPR024704; SMC.
DR InterPro; IPR041741; SMC3_ABC_euk.
DR InterPro; IPR010935; SMC_hinge.
DR InterPro; IPR036277; SMC_hinge_sf.
DR PANTHER; PTHR43977:SF4; SMC HINGE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR43977; STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3; 1.
DR Pfam; PF06470; SMC_hinge; 1.
DR Pfam; PF02463; SMC_N; 1.
DR PIRSF; PIRSF005719; SMC; 1.
DR SMART; SM00968; SMC_hinge; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF75553; Smc hinge domain; 1.
PE 3: Inferred from homology;
KW Cell cycle {ECO:0000256|ARBA:ARBA00022776};
KW Cell division {ECO:0000256|ARBA:ARBA00022618};
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Meiosis {ECO:0000256|ARBA:ARBA00023254};
KW Mitosis {ECO:0000256|ARBA:ARBA00022776};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PIRNR:PIRNR005719};
KW Reference proteome {ECO:0000313|Proteomes:UP000028999}.
FT DOMAIN 538..638
FT /note="SMC hinge"
FT /evidence="ECO:0000259|SMART:SM00968"
FT COILED 205..394
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 873..907
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1217 AA; 140809 MW; A59131923EBD59A7 CRC64;
MYIKLVPFPP SKIVIIEGFK SYNEQTATED FSSKVNCVVG ANGSGKSNFF HAIRFVLSDF
FQNLRNEDRN ALLHEGVGHQ VGSAFVEIVF DNSDNRIPVD KDEIRLRRAI GLKKDEYFLD
GKHITKNEVV DLLESAGFSR SNPYYVVQQG KIASLTMMKD SERLDLLKEI GGTRVYEEKR
CESLKIMQDT GNRMTCLTGI KRNHIIQAVQ YLDEKLRELD EEKEELRKYQ QLDKQRKSLE
YTIYEKQLHD TREKLEQTEA ERTKASEEST KMYDRVEKAQ DECRSLDESL AGLTKELQTM
NNKKETVEAL KTEAIKKKTK LELDENDLKE RIAGNIQSKN DALEQLSMVE REREDSLKEL
EAITPLYESQ VDKEKQTTKR IMELEKKLNI LYQKKGRATQ FSDKATRDEW LRKETKYLKR
VLDSNMGQEQ KLQDEIFGLN TDLKERDAHI KNHEVEISEL DTHISKSHEQ FNIKKRERDE
EHRKRREKWG EESQLSSEID KLKMELERAK KNLDHATPGD VRRGLISIKR ICSEHKINGV
FGPLVELVDC DENLFHVVVE NDDISTKIIE HLNSRKGGRV TFIPLNRVNA PHVNYPQCSD
AIPLLRRLKF DSKFAPAFGQ VFGRTVVCQD LNVATRVAKS DGLDCITLEG DQVSRKGGMT
GGFYDHRRSK LRLMNTIIQN MKSIDTKEKV LEDVRRQLQD ILSIIYFDQQ ITQIVTEKQR
LESDWTHSRL QVEQLKQEIA NETKQKHAIH IALEHKEKSL GDVRIQMEQL RSSMAMKEAE
MATELVDHLT PEETEELSRL NPEIEDLKDK LIAFKTDRIE TETRKAELET NLSTNLKRRI
DELHATIASV DDYSLPSSAG LETQELDDAK LLVEEFTNEL QGLCRSIDEK TKQVKKIKDK
KAKLKTLQDD CEMKVQDANK KLEELFSLRN TLLSKQEEYR KKIMGLGPFS SESFDMYKQK
SIKELQKVLH GCSEQLQQFS HVNKKALDQY VNFTEQREEL QKRKTELDAG DEKIKELITV
LDQQKDESIE RTYKMVSFHF REIFSQLVQV YIVKWVTKIM WTLHVLCASQ DRDHDDEDGC
GEAATERRVE KYDGITVKVS FNDQGETRSM KQLSGGQKTV VALALIFAIQ KCDPAPFYLF
DEIDAALDTQ YRTAVGNMIR GLADDSVSTQ FITTTFRPEL VKIADKMYGV FHENNASIVK
VISKEQALNF IQNDQSP
//
