ID A0A078MFD5_9STAP Unreviewed; 713 AA.
AC A0A078MFD5;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 24-JAN-2024, entry version 33.
DE RecName: Full=Small ribosomal subunit protein bS1 {ECO:0000256|ARBA:ARBA00035293};
DE AltName: Full=30S ribosomal protein S1 {ECO:0000256|ARBA:ARBA00035517};
GN Name=rpsA_2 {ECO:0000313|EMBL:CEA03411.1};
GN ORFNames=BN1048_02074 {ECO:0000313|EMBL:CEA03411.1};
OS Jeotgalicoccus saudimassiliensis.
OC Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
OC Jeotgalicoccus.
OX NCBI_TaxID=1461582 {ECO:0000313|EMBL:CEA03411.1, ECO:0000313|Proteomes:UP000044136};
RN [1] {ECO:0000313|EMBL:CEA03411.1, ECO:0000313|Proteomes:UP000044136}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=13MG44_air {ECO:0000313|EMBL:CEA03411.1,
RC ECO:0000313|Proteomes:UP000044136};
RA Urmite Genomes Urmite Genomes;
RL Submitted (JUL-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Binds mRNA; thus facilitating recognition of the initiation
CC point. It is needed to translate mRNA with a short Shine-Dalgarno (SD)
CC purine-rich sequence. {ECO:0000256|ARBA:ARBA00025604}.
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DR EMBL; CCSE01000001; CEA03411.1; -; Genomic_DNA.
DR RefSeq; WP_035810937.1; NZ_CCSE01000001.1.
DR AlphaFoldDB; A0A078MFD5; -.
DR STRING; 1461582.BN1048_02074; -.
DR eggNOG; COG2183; Bacteria.
DR HOGENOM; CLU_009833_0_2_9; -.
DR OrthoDB; 9804714at2; -.
DR Proteomes; UP000044136; Unassembled WGS sequence.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000044136};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980,
KW ECO:0000313|EMBL:CEA03411.1}.
FT DOMAIN 642..711
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 713 AA; 80737 MW; 9E5DBB4B455D758B CRC64;
MTHELVKEIA TEMKINKRHI EKVLELLAEK NTVPFIARYR KEQTGGLDEV TIKEIETKYL
YLENLNKRKE EVIRLIDEQG MLTDELHQDI LKQTKQSRVE DLYRPFKQKK KTRATEAKRL
GLEPLAKIIL AGKHRDIETK AREYLTEEVT SVEMAIKGAQ DIIAEIVSDN PRYRLYILKI
IKDTSEIVSA VKKNADDEQG VFEMYYEYAE RIKNIVPHRV LALNRGEALK VLTVKLSHDT
ERIVKYLKKE VIDEHAKTKE LMTAAIEDSM KRLILPSLER EVRADLTETS EKHAVMVFEE
NLKRLLLQPP LKGRVILGLD PAYRTGCKLA VINDTGSYLA KDVIYPHKPV NKKETAKSVI
LKMIKKHDVS LIAIGNGTAS RESEEFIGEL IKEEKLEIPY IIVNEAGASV YSASEIAREE
FPDFNVEERS AVSIARRVHD PLSELVKIDP KSIGVGQYQH DINQKFLTES LNFVVETAVN
QVGVNLNTAS TTLLQHVAGL SPVISKNIVA FREENGGFKK RSELKKVARL GDKTYEQCVG
FLRIFNGKEP LDVTPIHPEQ YKNTYKLIET LGLTIDNLGE NVMSEKLDAL NIKETAEMLN
IGIPTLEDII SSLKAPMRDI RDKYDTPLLK SDVLGIEDLK AGMTLSGTVR NVTDFGAFVD
VGVKQDGLVH VSQISNRFVK HPLEVVNTGD IVEVKVMDVD VQKNRISLTM KNI
//