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Database: UniProt
Entry: A0A078MFD5_9STAP
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ID   A0A078MFD5_9STAP        Unreviewed;       713 AA.
AC   A0A078MFD5;
DT   29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT   29-OCT-2014, sequence version 1.
DT   24-JAN-2024, entry version 33.
DE   RecName: Full=Small ribosomal subunit protein bS1 {ECO:0000256|ARBA:ARBA00035293};
DE   AltName: Full=30S ribosomal protein S1 {ECO:0000256|ARBA:ARBA00035517};
GN   Name=rpsA_2 {ECO:0000313|EMBL:CEA03411.1};
GN   ORFNames=BN1048_02074 {ECO:0000313|EMBL:CEA03411.1};
OS   Jeotgalicoccus saudimassiliensis.
OC   Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
OC   Jeotgalicoccus.
OX   NCBI_TaxID=1461582 {ECO:0000313|EMBL:CEA03411.1, ECO:0000313|Proteomes:UP000044136};
RN   [1] {ECO:0000313|EMBL:CEA03411.1, ECO:0000313|Proteomes:UP000044136}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=13MG44_air {ECO:0000313|EMBL:CEA03411.1,
RC   ECO:0000313|Proteomes:UP000044136};
RA   Urmite Genomes Urmite Genomes;
RL   Submitted (JUL-2014) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Binds mRNA; thus facilitating recognition of the initiation
CC       point. It is needed to translate mRNA with a short Shine-Dalgarno (SD)
CC       purine-rich sequence. {ECO:0000256|ARBA:ARBA00025604}.
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DR   EMBL; CCSE01000001; CEA03411.1; -; Genomic_DNA.
DR   RefSeq; WP_035810937.1; NZ_CCSE01000001.1.
DR   AlphaFoldDB; A0A078MFD5; -.
DR   STRING; 1461582.BN1048_02074; -.
DR   eggNOG; COG2183; Bacteria.
DR   HOGENOM; CLU_009833_0_2_9; -.
DR   OrthoDB; 9804714at2; -.
DR   Proteomes; UP000044136; Unassembled WGS sequence.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR   CDD; cd05685; S1_Tex; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR   Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR   Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR   Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR   InterPro; IPR041692; HHH_9.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR010994; RuvA_2-like.
DR   InterPro; IPR003029; S1_domain.
DR   InterPro; IPR044146; S1_Tex.
DR   InterPro; IPR023323; Tex-like_dom_sf.
DR   InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR   InterPro; IPR018974; Tex-like_N.
DR   InterPro; IPR032639; Tex_YqgF.
DR   InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR   InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR   PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR   PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR   Pfam; PF12836; HHH_3; 1.
DR   Pfam; PF17674; HHH_9; 1.
DR   Pfam; PF00575; S1; 1.
DR   Pfam; PF09371; Tex_N; 1.
DR   Pfam; PF16921; Tex_YqgF; 1.
DR   SMART; SM00316; S1; 1.
DR   SMART; SM00732; YqgFc; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR   SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR   PROSITE; PS50126; S1; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000044136};
KW   Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW   Ribosomal protein {ECO:0000256|ARBA:ARBA00022980,
KW   ECO:0000313|EMBL:CEA03411.1}.
FT   DOMAIN          642..711
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
SQ   SEQUENCE   713 AA;  80737 MW;  9E5DBB4B455D758B CRC64;
     MTHELVKEIA TEMKINKRHI EKVLELLAEK NTVPFIARYR KEQTGGLDEV TIKEIETKYL
     YLENLNKRKE EVIRLIDEQG MLTDELHQDI LKQTKQSRVE DLYRPFKQKK KTRATEAKRL
     GLEPLAKIIL AGKHRDIETK AREYLTEEVT SVEMAIKGAQ DIIAEIVSDN PRYRLYILKI
     IKDTSEIVSA VKKNADDEQG VFEMYYEYAE RIKNIVPHRV LALNRGEALK VLTVKLSHDT
     ERIVKYLKKE VIDEHAKTKE LMTAAIEDSM KRLILPSLER EVRADLTETS EKHAVMVFEE
     NLKRLLLQPP LKGRVILGLD PAYRTGCKLA VINDTGSYLA KDVIYPHKPV NKKETAKSVI
     LKMIKKHDVS LIAIGNGTAS RESEEFIGEL IKEEKLEIPY IIVNEAGASV YSASEIAREE
     FPDFNVEERS AVSIARRVHD PLSELVKIDP KSIGVGQYQH DINQKFLTES LNFVVETAVN
     QVGVNLNTAS TTLLQHVAGL SPVISKNIVA FREENGGFKK RSELKKVARL GDKTYEQCVG
     FLRIFNGKEP LDVTPIHPEQ YKNTYKLIET LGLTIDNLGE NVMSEKLDAL NIKETAEMLN
     IGIPTLEDII SSLKAPMRDI RDKYDTPLLK SDVLGIEDLK AGMTLSGTVR NVTDFGAFVD
     VGVKQDGLVH VSQISNRFVK HPLEVVNTGD IVEVKVMDVD VQKNRISLTM KNI
//
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